Gene RPC_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3055 
Symbol 
ID3973373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3387188 
End bp3387454 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content64% 
IMG OID637926165 
Producthypothetical protein 
Protein accessionYP_532918 
Protein GI90424548 
COG category[S] Function unknown 
COG ID[COG5639] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.317801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGCCG ATCCCCCGGC TCAGGGGGTC AAAATTGCAC GCCGAATAAC ACTGAAACTC 
GGCCTGATCG CCGACGACAA GCCGGTGAAG GTTACGCTGG AGCTTCCCGC CAGCCTACAT
CGCGACCTGA CCGCCTATGC GGAAATCCTC GCCCGCGAGG CGGGCCAAGC CGCCGCCGAT
CCCGTTCGCC TGATCGTCCC CATGCTGGAG CGGTTCATGG CAACGGACCG GGGATTTGCA
AAGGCGCGAC GCCCCCCTCG TTACTGA
 
Protein sequence
MNADPPAQGV KIARRITLKL GLIADDKPVK VTLELPASLH RDLTAYAEIL AREAGQAAAD 
PVRLIVPMLE RFMATDRGFA KARRPPRY