| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3033 |
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| Symbol | |
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| ID | 3973486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3337145 |
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| End bp | 3339634 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926144 |
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| Product | thioesterase |
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| Protein accession | YP_532897 |
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| Protein GI | 90424527 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis
[COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.862159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.955907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATG AGGTCGTACG GCAAACCAAT CGGCGAGCCT ATGGTCGTCT GGATCGCGCG
CTGAAGCTGG CCGGGCTGGG GCAGCACGCG CAGTTCCTCA ATTGGGGTTA CGCCCCGGTT
GCCGGCTTCG CAAACGAGGC CGATGGCCCC GCACCGGACG CCGGTCCCAA TGCGATGCAG
GAGCGTCTGG TCGCTGAACT GATCGGTCGT GCGTCGCTCG ACCAGAAACG CCTGCTCGAC
GTGGGATGCG GACGTGGCGG CTCGCTCGTG TTCATGCAAC GCCACTATCG TCCGCTCGCA
TTGTCCGGCA TCGATCTCAG CGCCGCCAAC GTCGAGCGGG CGCGTCAGGC GCTCGGTGGT
GCGCCGACGG GTACGGCACG AATACGCCTT CAGGTCGCCG ATGCTTGCGC ACTGCCGCAA
ACGGACGCGT CGCAGGACAT CGTCTTCAAC CTGGAATCGT CTGGCGCCTA TCCTGACCTG
GTGAGCTTCT TCGAGCACGT CCGCCGAGTT CTGGTGGAGG ACGGGCTGTT CCTCTACGGC
GATGTCTGGC CGGCTACGCT GATTACACCG TTGCGGCACG TGCTCGATGG GCTGGGATTT
TCGGCCGAGA TCGTTCGCGA CGTCACGCCA CAGGTCCTCG CGGCACGCGG TCTGGCGTCG
GCGGGAATTC TCGGCCGCCT CTCGCAGGCC GATCCGGACC TGTGTGCCGA CACCGAAAGC
TATTTTGCTC TGCCGGGCTC CGCGATCTGG GAAAGTCTCG AGCGAGGCGA TCTTCGCTAC
ATTCTAGGTC GATGGCGTCG GACATCACGT CCGCGGTCAC CGCGGCCGGA TGGTGAACGG
AGCCTTTGCA GCCGATCGGA ACGGCTGCAG GCTCTGCTCC AGCAAGGAGC CGATCGAACG
GAGTCCAAGA AGCGCTGGTT TCCGTTCGGA TCTCCGGGTG CCGATGCCGC CATCAACGTT
CTGGCATTCC CTTATGCGGT CGGTGGGGCA TCGGCGTTTC GCGGTTGGCT GCATGTGGTC
CCGAAGGATT GGGCGTTCTG TCCCGTGCAA CTGCCCGGAC GCGAGCAGCG GCTCGCTGAG
CCGGCATTCC GTACCGTCGA GACTGCCGTG GAGGCGCTTC TTCCCCTCGT GCTTCCCTTT
GCTTCGCGGC CGCTGGCTCT GGTCGGATGG AGCCTCGGAT GCAAGCTGGC CTTCGAGTTC
GCCCGCCGGT GGGAGGAGAG GACCGGCCAG CCGCCGCGGC TGCTGTTGCT CGGTGCATGC
CCGAGCCCGC GCGTGTCGCG GTCGAACTGG CAGTTCCTGG AAGGTGAGAA CTGGGCCGCA
CGACTCCGCG CGCTCGGCGG CACGCCTGAG GCGGTGCTGG CGAGCAGCGA GATGCTGGGA
ACGCTCGAAG GCGCGCTGCA TGGCGATTTC GAAATGGCCG CGCGTTACCG GTGCGAAGCG
ACCATCCGCG CTCCGATTTT CGCTGTCGCT GCCGAAGACG ACAAGCTGGT CTCCGTGGAC
GAGGTATCCG CATGGCGCCA TTGCACGAGC GGCGGATTCT CGATGGAGCA GCGTCCGGGC
GGACATTTCC TCGTCCGGGA AAGCGGCCGA CAGATTCCGG AGCTCATGGT CGAGAAACTG
TCAGGGTTGC TCGGCGCAGG CAGCATCGGA CACTCCGGCG AGCGTTCCGT CTGCTCGTCA
TCCAACGCGT GGTTTCCATG CAATCGTTTG CCGTTGCCAG ACGCTACGAG GTTGATCTGC
TTTCATCATG CCGGAGGAAA TGCGCAATCT TACCGGGATT GGACTTCGCA TCCGGCTCTC
GGGAAATTCG CTGTATGCCC CGTCGAGCTG CCGGGGCGCG GCACGCGGTA CGGCGAAGCG
GCGGCGCGCG ATCTGACCGG ACTGATCGAC GCCTGCTGGC CACATTTTCG CGACGTCATC
GGCACTGAAC AGCCGGTCGT TCTGTTCGGC CACAGCCTCG GTGCGCTCGT CGCCTACGAG
GTCGCTCGGC GCATGCAGGC GGACGATCGG CCGCCTGCAG CGTTGATCGC CTCGGCGCGG
CGTGCGCCGA CATCGGTCTC GCCGGAGCCA TGGCGTCACA TGTTGCAGGA CGGGGAGCTG
GTCGACGAAC TCCAACGTCT CGGCGGAACC GCTGCCGAGA TCCTCAGGCA CCGTGAATTG
CTCGATCTTG TCCTGCCAAC CATTCGATCT GACTTCGCTC TGACAGAAAC TTATCTTCAT
CCGCCGGGAT CGAAGCTCTC GTGTCCGGTG ATTGCGATAC GCGGTACGGC CGACCACGAG
GTCTCGGCCG GCGATCTGGA TCGTTGGCAA GAGGTGTCGA GCGCGCGTTT CGAACGCTGG
ACGTTCGACG GCGACCACTT CTATCTCAAC GACGCCACGA TACGCGATCG ACTGCTCGAT
CGACTTGTAT CTCGTGTGGC GAGTTTGATG TCGCACGAGC CGTTACCGCG CGCGGCCGCC
CTCGGTGGCG CTGTACAACG CGGCCCGTAA
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| Protein sequence | MDDEVVRQTN RRAYGRLDRA LKLAGLGQHA QFLNWGYAPV AGFANEADGP APDAGPNAMQ
ERLVAELIGR ASLDQKRLLD VGCGRGGSLV FMQRHYRPLA LSGIDLSAAN VERARQALGG
APTGTARIRL QVADACALPQ TDASQDIVFN LESSGAYPDL VSFFEHVRRV LVEDGLFLYG
DVWPATLITP LRHVLDGLGF SAEIVRDVTP QVLAARGLAS AGILGRLSQA DPDLCADTES
YFALPGSAIW ESLERGDLRY ILGRWRRTSR PRSPRPDGER SLCSRSERLQ ALLQQGADRT
ESKKRWFPFG SPGADAAINV LAFPYAVGGA SAFRGWLHVV PKDWAFCPVQ LPGREQRLAE
PAFRTVETAV EALLPLVLPF ASRPLALVGW SLGCKLAFEF ARRWEERTGQ PPRLLLLGAC
PSPRVSRSNW QFLEGENWAA RLRALGGTPE AVLASSEMLG TLEGALHGDF EMAARYRCEA
TIRAPIFAVA AEDDKLVSVD EVSAWRHCTS GGFSMEQRPG GHFLVRESGR QIPELMVEKL
SGLLGAGSIG HSGERSVCSS SNAWFPCNRL PLPDATRLIC FHHAGGNAQS YRDWTSHPAL
GKFAVCPVEL PGRGTRYGEA AARDLTGLID ACWPHFRDVI GTEQPVVLFG HSLGALVAYE
VARRMQADDR PPAALIASAR RAPTSVSPEP WRHMLQDGEL VDELQRLGGT AAEILRHREL
LDLVLPTIRS DFALTETYLH PPGSKLSCPV IAIRGTADHE VSAGDLDRWQ EVSSARFERW
TFDGDHFYLN DATIRDRLLD RLVSRVASLM SHEPLPRAAA LGGAVQRGP
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