| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3026 |
|---|
| Symbol | |
|---|
| ID | 3973479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 3325227 |
|---|
| End bp | 3326420 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637926137 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_532890 |
|---|
| Protein GI | 90424520 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.38166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTG CGGCGGTGAG CATCTCGACT GCGGCGCTGG TCTATCTGTT CAAGCCGCCG
AACGAACGGC AGGCGATCGG TGCCCTTGCC GACCAGGTCG AACTGCTCGA TCGGGCCGCG
CGCGTCGCGC CGAGCCTGGT GAGCGTCCGG CAAGAGCCCG GCGGCGGCCA GGTCGAGGCC
AACCTCACCG CCTGGCTGCG CCAGGCCGTC GCCGAACGCG GCATGCCGCG CGACGTCGTG
GTGTCCCGGA ACGACCATCT GCCGCTGCTG TCAGTTCCGG TCGATCGCGG CTGGATTGTC
ACCGAGATCG CCGACCTACC CCCGGAAGGC GGCATCCTCA ACAGGCTGTT GAAGTGGCTC
GCCTTCGTCA CCTTCGGGGT GTTGCCGGTG GCACTGTTTT TCGCCAATCG CATGGTCAAG
CCGCTGGTGG TGATCGAGCG GGCGATCGCG AACGTCGGTC CAGACGGCCT GCTGCCCGAA
CTCCCGATCG AAGGACCAGC CGAGGTGCGT CTCGCGGCCA AGGCGCTCAA CTCGCTGTCC
TCGCGCCTGA AGGTGGCGAT GGACAGCCGG ATGCGCGTGG TCGCCGCCGC CGGCCATGAT
CTGCGAACCC CGATCACCCG CATGCGCCTG CGCGCAGAGT TCGTCGAGGA CGACGATGAT
CGCACGATGT GGCTGAAAGA TATCGATGAG CTCGATCGCA TTGCCGACAG CGCGATCCAG
CTGGTGCGCG AGGAAGCGGG GAAGACGACG CCCGAATCCC TCGGGCTCGA CCTCCTGATC
GCCGAAACGG TCGAGGAGTT GCGGGCGCTG TCTTACGACG TCAACCTCAC CCGCACCGCG
GCGGGCTGCG TGCTCGCCGA CCGGACCAGC CTGAAGCGCG GGTTTCGCAA TCTGATCATC
AACGCCGCCA CCCACGGCAA GCGCGCGCGG GTCGCGATCG AGAGCGCGCC GTCGGAAGTG
AGCGTCATCA TCGAAGACGA CGGCCCGGGG ATTCCCTCCG ACATGCTCGG GCGGGTGTTC
GAACCGTTCT TCAGCGCCAA TCGCGCGCGC ACCAAGCATT TCGGCGGCGC CGGGCTCGGC
CTCACCATCG CCCATGAAAT CGTGCAGCGC GCCGGCGGGA CCATCAAAAT CGAAAACGGT
CGCCTGCGCG GGTTGATGCA GACCGTGCGG CTGCCGGCTC ATCGATCGTC GTGA
|
|---|
| Protein sequence | MIVAAVSIST AALVYLFKPP NERQAIGALA DQVELLDRAA RVAPSLVSVR QEPGGGQVEA
NLTAWLRQAV AERGMPRDVV VSRNDHLPLL SVPVDRGWIV TEIADLPPEG GILNRLLKWL
AFVTFGVLPV ALFFANRMVK PLVVIERAIA NVGPDGLLPE LPIEGPAEVR LAAKALNSLS
SRLKVAMDSR MRVVAAAGHD LRTPITRMRL RAEFVEDDDD RTMWLKDIDE LDRIADSAIQ
LVREEAGKTT PESLGLDLLI AETVEELRAL SYDVNLTRTA AGCVLADRTS LKRGFRNLII
NAATHGKRAR VAIESAPSEV SVIIEDDGPG IPSDMLGRVF EPFFSANRAR TKHFGGAGLG
LTIAHEIVQR AGGTIKIENG RLRGLMQTVR LPAHRSS
|
|---|
| |