| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2953 |
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| Symbol | |
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| ID | 3969952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3230493 |
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| End bp | 3231719 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926064 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_532817 |
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| Protein GI | 90424447 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.137688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA AGAGTTCCGC GCTTCTGCTC GGCACCGCAT TTGTACTTGC CACCGCTGCT
CTTGCGTCCG CCCAGAGCAC GGACAAGACG GTCAAGATCG GCTCGCTCAG CGACCAGTCC
GGCCTTTATG CGGACGTCGG CGGTCCCGGT TCGACGCTGG CTGCCCAGAT GGCGGTGGAA
GACTCCGGCC TGACGGCCAA AGGCTGGAAG ATCGATGTGA TCTCCGGCGA TCACCAGAAC
AAGCCCGACA TCGGCTCGAA CATCGCGCGG CAGTGGTTCG ATGTGGACAA GGTCGATGTC
GTGGTCGATA CGCCGAACTC CGGCGTTGCG CTGGCGGTCA GCAACATCAT CAAGGAAAAG
AACGGGGTTT TCCTCAATTC GGGCGCCGGC AGCTCGGATC TGACCAACGC GCAATGCTCG
CCCAATACGA TTCACTGGAC CTACGACACC TACATGCTGG CGCACGGCAC CGGCTCCGCC
TTGACCAAGG CCGGCGGCGA CAGCTGGTTT TTCCTGACCG CCGACTACGC GTTCGGCGCG
GCGCTGGAGC GTGACACCAC GGCCGCCGTC AACGCGGGGG GCGGCAAGGT GCTCGGTGGC
GTGAAGCACC CGCTCAACAC CTCCGACTTC TCGTCCTTCC TGCTGCAGGC GCAGGCCTCC
AAGGCCAAGG TGATCGGTCT CGCCAATGCC GGCGGCGACA CTTCCAACGC CATCAAGCAG
GCGGCGGAAT TCGGCATCAT CGCCGGCGGC CAGAAGCTCG CCGGGCTCCT GATGTTCATC
ACCGACGTTC ACGCCATAGG CTTGCCGGTG GCCCAGGGTC TGAACTTCAC CGAGACGTTC
TACTGGGACG CCAACGAGCA GACGAGGGCG TTTTCGAAGC GGTTCCAGGA CCGGATGCGC
AACAAGCAGG TGCCGACCAT GTCGCAGGCC GGCGTGTATT CGGCGCTGAC CCACTACTTC
AAGACGCTCG ATGCGATGGG CGGCAATTCG CATGACGGCG CCAAGATCGT CGCCAAGATG
AAGGAAATGC CGACCGACGA TCCGTTGTTC GGCAAGGGCT CGATCCAGCC CAACGGCCGC
AAGATCCACC CGGCCTACCT GTTCGAAGTG AAGAAGCCCG CGGAATCCAA GGGACCGTGG
GACTATTACA AGCTGGTCGC CACCATTCCG GCGGAAGAAG CCTTCACGCC GCTCGCCAAG
AGCACGTGCC CGCTGTTGAA GAAGTGA
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| Protein sequence | MKNKSSALLL GTAFVLATAA LASAQSTDKT VKIGSLSDQS GLYADVGGPG STLAAQMAVE
DSGLTAKGWK IDVISGDHQN KPDIGSNIAR QWFDVDKVDV VVDTPNSGVA LAVSNIIKEK
NGVFLNSGAG SSDLTNAQCS PNTIHWTYDT YMLAHGTGSA LTKAGGDSWF FLTADYAFGA
ALERDTTAAV NAGGGKVLGG VKHPLNTSDF SSFLLQAQAS KAKVIGLANA GGDTSNAIKQ
AAEFGIIAGG QKLAGLLMFI TDVHAIGLPV AQGLNFTETF YWDANEQTRA FSKRFQDRMR
NKQVPTMSQA GVYSALTHYF KTLDAMGGNS HDGAKIVAKM KEMPTDDPLF GKGSIQPNGR
KIHPAYLFEV KKPAESKGPW DYYKLVATIP AEEAFTPLAK STCPLLKK
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