| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2906 |
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| Symbol | |
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| ID | 3971934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3161316 |
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| End bp | 3162023 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926019 |
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| Product | TonB-like |
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| Protein accession | YP_532773 |
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| Protein GI | 90424403 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.155829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.22869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTTCA CCGCGCGACA CGACCGCTCG TCCGAGACGA TTGGTCCGGA AGGCCATGAC
CCTGAGCCGC CGCCGACCAC CGAGCTTTTG CGGCTAATCC TCTTTCCGGC GATCGTCGGG
ATGTTGTTTA TCGGCGGTGT CTACTGGCTT CGCCTCCAGG TCGCAGCGGG CGGCGGCACG
CCGGAATCGA CCACGCTCGT CCAGGTCCAT CTGCTGCCGC GCCCGGATCC AATCCCGATC
CCGGTGACTC CGGCCACTCA ATCGGCCGCC ATCAGCGTTC CAAGTCCGAC CAGCGGTCAG
ACCGAAGCGC CAGCCGCCGT GGCCAACCAG ACCTTGGCCG CGTTGCCGAC TGAGCCGCCA
ACGGTCTCCG AACCGGCGGT GCCAAGCACG AGCCCGCCAT CCACCACGCA TGCGCCGAGT
CCTGCCACGC TGGAATTCAG GAATGCCTTG CTGCGGCACA TCGCCCAGTT TCAGCGATAC
CCAAGGGCTG CCGAGCCCAA GCGCTTGCAA GGCACGGTTC GCGCGGTGTT CTCGGTCAGC
CGGGACGGCA GGCTTCTGGG CGCCTGGGTG AAGACCAGCT CAGGCGAAGT CGTGCTCGAC
CAGGCCGCGA TTGAGACGCT GCGCCGCGCC CAGCCGCTCC CGGTTATTCC TTCGGCCTTG
CCCGATCCGA TCAAGATCGA ATTGGCGCTC GGCTTCGACC CGCCGTGA
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| Protein sequence | MRFTARHDRS SETIGPEGHD PEPPPTTELL RLILFPAIVG MLFIGGVYWL RLQVAAGGGT
PESTTLVQVH LLPRPDPIPI PVTPATQSAA ISVPSPTSGQ TEAPAAVANQ TLAALPTEPP
TVSEPAVPST SPPSTTHAPS PATLEFRNAL LRHIAQFQRY PRAAEPKRLQ GTVRAVFSVS
RDGRLLGAWV KTSSGEVVLD QAAIETLRRA QPLPVIPSAL PDPIKIELAL GFDPP
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