| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2887 |
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| Symbol | |
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| ID | 3970037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3140701 |
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| End bp | 3141402 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637925999 |
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| Product | ThiJ/PfpI |
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| Protein accession | YP_532754 |
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| Protein GI | 90424384 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00139108 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0511878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTGTCC AGATCGGTCT GTTGCTGTTC CCTCACCTGA CCCAGCTCGA CCTCACCGGT
CCGCTGCAGG TGTTTTCGCG CATCCCCGGC GCCACGGTGC ATCTCGTCGC CAAGCGGATC
GCGCCGGTGC CGAGCGACAC CGTGCTGAGC CTGCTGCCGA CCATCGCCTT CGTCGATTGC
CCGCAGCTCG ACGTGATCTG CGTGCCGGGC GGCACCGGGA CCGACGCGTT GCTCGGCGAC
GACGAGACGC TGGCATTTTT GCGCAGCCAG TCCGCTGGCG CGCGCTTCGT CACCTCGGTG
TGTACCGGAT CGCTGGTGCT GGGCGCGGCC GGGCTGCTGC GCGGCTACCG CGCCACCACG
CACTGGTCGG CGATGCCGCA TCTGGCGGCG TTCGGCGCAA TCCCCACCGC CTCACGGGTT
TGCATCGATC GCGATCGCAT CAGCGGCGGC GGGGGCACCG CCGGAATCGA CTTCGCGCTG
ACGCTGACCG AGATGCTGAC CGATCGGACC ACCGCACAGG CAATTCAGTT GATGCTGGAA
TACGACCCGG CGCCGCCGTT CGACGCCGGC TCGCCCGCCT CCGCTCCGCC CGCGGTGCTG
GCGCTGCTCG AGGACAGAAT GGCCGCCGCG CGGCAGCGGC GAAGCGACGC AGTCAGCCGC
GCCGCGGCGC GACTGATTGC CGGCGCCTCA ACTCAGTTCT GA
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| Protein sequence | MPVQIGLLLF PHLTQLDLTG PLQVFSRIPG ATVHLVAKRI APVPSDTVLS LLPTIAFVDC
PQLDVICVPG GTGTDALLGD DETLAFLRSQ SAGARFVTSV CTGSLVLGAA GLLRGYRATT
HWSAMPHLAA FGAIPTASRV CIDRDRISGG GGTAGIDFAL TLTEMLTDRT TAQAIQLMLE
YDPAPPFDAG SPASAPPAVL ALLEDRMAAA RQRRSDAVSR AAARLIAGAS TQF
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