Gene RPC_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2875 
Symbolaat 
ID3970025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3128745 
End bp3129437 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID637925987 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_532742 
Protein GI90424372 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.306396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.20584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCC GCGACTCCGC ATCATCCGAC ATCACGCCCG AAGTGCTGCT GCGCGCTTAT 
GCCTGCGGCA TCTTTCCGAT GGCCGAAAGC GTCGACGATC CGACGCTGTT CTGGGTCGAA
CCGGAGCGGC GCGGCATCAT CCCGCTCGAC GGCTTCAAGG TGGCGTCGCG GCTGGCGCGC
ACGGTGCGCT CGGATGTGTT TACCGTCAGC GTCGATCGGG CTTTCAAACA GGTGATCGAC
GGCTGCGCGG CGCCGCAGCC CGGCCGCGAA GATACCTGGA TCAACCGGCG GATCCGCGAG
CTCTATATCG GGCTGTATCA GCTCGGACAC TGCCATAGCG TCGAAGTCTG GCAGAACGAC
GATCTGGTCG GCGGGCTGTA CGGGGTCAAT CTCGGCCGCG CGTTCTTCGG CGAAAGCATG
TTCCACCGCG CCCGCGACGC CTCCAAGGTG GCGCTGGTGC ATCTGGTGGC GCGGCTGATC
GAAGGCGGCT TCGTGCTGCT CGACACCCAA TTCGTCACCG AGCATCTGCG CACGTTCGGC
GCCACCGAGG TGCCGCGGCG ACGCTACCGG GCGATGCTGG ATGTCGCCAT CACCGGCGCG
GCGGATTTCG CCCGGCTGCC GACCGAACAG CCGATCGCCG GCACCCGGGC GCTGGCGATC
ATCTCCGGGC GCGAGGGCTT GGGGCGCGGA TGA
 
Protein sequence
MTGRDSASSD ITPEVLLRAY ACGIFPMAES VDDPTLFWVE PERRGIIPLD GFKVASRLAR 
TVRSDVFTVS VDRAFKQVID GCAAPQPGRE DTWINRRIRE LYIGLYQLGH CHSVEVWQND
DLVGGLYGVN LGRAFFGESM FHRARDASKV ALVHLVARLI EGGFVLLDTQ FVTEHLRTFG
ATEVPRRRYR AMLDVAITGA ADFARLPTEQ PIAGTRALAI ISGREGLGRG