| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2856 |
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| Symbol | |
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| ID | 3970045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3107774 |
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| End bp | 3109393 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925968 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_532723 |
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| Protein GI | 90424353 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.174371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCGG ACCATGATCA GCGACGCCCC GGCGTCCGGC AGAGCATGTC CAGCCTGCAC
ACCTGGACCG GCCTGCTGCT CGGCTGGATT CTCTATGCGA TGTTCCTGAC CGGCACGGTG
TCTTATTTCA AGGACGAGTT GTCGCAATGG ATGCGACCGG AATTGCCGCG GCTGTCGCAA
CTTCCCGATC CGGCGGCGGT GGCGCAGCGG GTCGCCGACG AGGTCGGCAG GATTGCGGCC
GGGACCTCGC AATGGAGTCT GCGTCTGCCC GACGCGCGTA ACAACAGCGT CTTTGCGTTC
TGGCGCGAAC CGACGCGCGA TCGCGGCCGG CGCGGCTTCG CTGAAGCCCA CTTCGATCCC
GCGACCGGTC AGCGCGTTTC GTCGCGCGAC ACCCAGGGCG GCGACTTCTT CTATCGCTTC
CACTTCCAGT TCCACTACAT GCCGGTGCTG TGGGGCAGGT GGCTTGCGGG AGCGGCGGCG
ATGGTGATGC TGGTGGCCAT CATCGCCGGC GTCATCACTC ACAAGAAGAT CTTCGTCGAT
TTCTTCACCT TCCGCTGGGG CAAGGGGCAG CGCTCCTGGC TCGATGCGCA TAATGCGCTG
TCGGTGTTCG GGCTGCCGTT CCATCTGATG ATCACCTACA CCGGGCTGGT GACCTTGATG
GCGCTCTACA TGCCCTGGGG CGACCGCGCG GCATTCACGA CCCCGGCCGA GCGCCAGCAA
CTGACCGCGC AGCTCAGTGC TTTCATCCAG CCCGGCCAAC CGAGCGGGCA GAATGCGCCG
TTGGCCTCGG TCGAAGACAT GGTGCGGCAG GCCGAGCAAC GCTGGGGCCG CGGCAGCGTC
GGGCGCGTCA ACGCCGTCAA TCCCAAAGAT GCGGCTGCGC GTGTGGCGGT GACTCGAAGC
GATGCCGGCC GCGTCTCGAT GAGCCCGCAA TACATCGAGT TCGACGGGGC CAGCGGCCGA
TTACTTGCGG TGCACGACCA GGTCGGCGCG GCGGCCGAGA CGCGCGGCGT GCTCTACGCG
CTGCACCTGG CACGCTTCGG CGACACCGCG ACGCGCTGGC TGTATTTTCT CGTCAGCTTC
ATGGGGACGG CCATGGTCGG CACCGGGCTG GTGATGTGGA CGGTCAAGCG GCGACAAAAG
CTGCCGGATC CGGACCGCCC GCATTTTGGT TTCCGGCTGG TGGAGCGGCT GAACATTGCG
AGCATCGCGG GTCTGTCGAT CGCGATGGCC GCATTTCTGT GGGGCAACCG CCTGCTGCCA
GTTGCGTTGC AGGGCCGCGC CGGCCTGGAG ATCGACGTCT TCTTCGTGGT TTGGGCGCTG
GCGCTGCTAC ACGCCGTGCT GCGGCCGGCC CGGTCGGCGT GGATCGAACA GCTATGGCTC
GCATCGGTGC TGTTGTTCTT CTTGCCGCTG CTCAATGCGC TGACCACGCA GCGTCCGCTC
TGGCACAGCC TGGTGGCGGG CGACCGGGTG TTCGTCGGCA TCGATCTGAT GTGCTGGGCG
CTGGCGGCGT TGCATGCGGT GGTCGCGATC GGCGTGGCCC GGCGGCGGAG CAATGTTGGG
CCGCGGTGCA ACAGCCATCC GAAGGCTGGC GTCAGCGCGA TGCCCGGGGC GGGAGCATGA
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| Protein sequence | MTADHDQRRP GVRQSMSSLH TWTGLLLGWI LYAMFLTGTV SYFKDELSQW MRPELPRLSQ
LPDPAAVAQR VADEVGRIAA GTSQWSLRLP DARNNSVFAF WREPTRDRGR RGFAEAHFDP
ATGQRVSSRD TQGGDFFYRF HFQFHYMPVL WGRWLAGAAA MVMLVAIIAG VITHKKIFVD
FFTFRWGKGQ RSWLDAHNAL SVFGLPFHLM ITYTGLVTLM ALYMPWGDRA AFTTPAERQQ
LTAQLSAFIQ PGQPSGQNAP LASVEDMVRQ AEQRWGRGSV GRVNAVNPKD AAARVAVTRS
DAGRVSMSPQ YIEFDGASGR LLAVHDQVGA AAETRGVLYA LHLARFGDTA TRWLYFLVSF
MGTAMVGTGL VMWTVKRRQK LPDPDRPHFG FRLVERLNIA SIAGLSIAMA AFLWGNRLLP
VALQGRAGLE IDVFFVVWAL ALLHAVLRPA RSAWIEQLWL ASVLLFFLPL LNALTTQRPL
WHSLVAGDRV FVGIDLMCWA LAALHAVVAI GVARRRSNVG PRCNSHPKAG VSAMPGAGA
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