Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2848 |
Symbol | |
ID | 3970076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3095464 |
End bp | 3096000 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637925960 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_532715 |
Protein GI | 90424345 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.114974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGGCGG CGGGTGCCAA ACCGGTTGTC GCTGCGCCGG TCGTCGAAGC GCCGCCGCGG AGTAGCAAGG GCGTCCTTGC AGAGGGGCAC GCAGCACCGG CCTTCGAACT GCCGCGCGAC GGCGGCGGCA TGGTATCTTC GCACAGCTTT GCCGGACGCA AGTTGGTGGT TTTCTTTTAT CCCCGCGCCA GCACCCCGGG CTGCACCAAA GAGGCGATCG ACTTCACCCG ATTGGCCGAC GCCTTCGCGA CCGCCGGGAT CGGCGTGCTC GGCATCTCCG CCGACAATCT GAAGGCCCAG GATGCATTTC GCGACAAGTA CCAACTGACC ACGCCGCTGT TGTCCGACGA GACCCATCAG ATCCTCGAAG CGTATGGCGT CTGGGGCGAA AAATCGATGT ACGGCAAGAT CTTTCAAGGC ATTCTTCGCA CCACGGTGCT GATCGGCAAG GACGGCCGCG TCGGCAAGAT CTGGCGCAAC GTCAAGGTTG ACGGCCATGC CGACGAGGTG CTGGCGGCAG CGATCGAATT GGAGTGA
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Protein sequence | MEAAGAKPVV AAPVVEAPPR SSKGVLAEGH AAPAFELPRD GGGMVSSHSF AGRKLVVFFY PRASTPGCTK EAIDFTRLAD AFATAGIGVL GISADNLKAQ DAFRDKYQLT TPLLSDETHQ ILEAYGVWGE KSMYGKIFQG ILRTTVLIGK DGRVGKIWRN VKVDGHADEV LAAAIELE
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