Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2834 |
Symbol | |
ID | 3970062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3076008 |
End bp | 3077075 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637925946 |
Product | diguanylate cyclase |
Protein accession | YP_532701 |
Protein GI | 90424331 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.15225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGCAC CCAGGGACGA GCACGAACGC ACCATGGCCT ATGCCGAGGT GGCGTTGCGT CAGATCAGAT CGTTGCGGCA GGATGCGCTG CCGCGCAACT ACGAGATCTG GTACGTCTAT GCGACCGGGC ACAATGCCCC GCTCAACAAG ATCATCAACG AAACGCTGGC GCGCAGCGGC AAGCTGAGCG AGTCCGACCT CGAACAGATC TACGACACCT ATTTGTCGCA TGGTCGTACC ACCGACCGCA TCGACAAGAT CGGCGCCCGC GTCGTCAGTG AAATCGAGGA CGTGATGTCG CTGATCACCG ACGCGCTCGG CTTGACCGCG AGTTTCGGCG ACAATCTCAG CGGCGCCAAT CAGAAGCTGT CGCTCGCCAA GGATCGCGCC CAGGTCAAGG CGGTGGTCGA ACGGCTGGTG GCCTCGACCC GGGAAATGCA GCAGGCCAAC AACGCGCTGG AGACCCGGCT GTCGACCTCG AAGCTCGAGA TCAACAATTT GCAGCACAAT CTCGAGGCGA TCCGCGCCGA AAGCCTCACC GATCCCTTGA CCGGTCTCGG CAACCGCAAG CACTTCGACC GCGCGGTCGA CGACGCCGTG CGCTGCGCCT CGGCGAGCCG GCAACCGCTG GCGCTGCTGA TGATCGACAT CGATCACTTC AAGTCGTTCA ACGACACCTA TGGCCACCTC ACCGGCGACC AGGTGCTGCG GCTGGTCGGC ATGTCGCTGA AGCAGAGCAT CAACGGCCAG GATATCATGG CCCGTTACGG CGGCGAGGAA TTCGCCGTGG TGCTGCCCAA CACCGGGCTG CGGCAGGCGA TCGCGGTCGC GGAGAACATC CGCCAGACCG TGACCTCCAA GGAACTGAAG AAGAAGTCCA CCGGGGAAAT TCTCGGCCGC GTCACCATCT CGGTCGGAGT GTCGACGCTG CGAGCCGACG ACGATACCGA CTCGCTGATC GAGCGCGCCG ACAGCTGCCT CTACGCCGCC AAGCGCAACG GCCGCAACCG AGTGATCTGC GAAATCGACC GCGACGACCT CGACCACGAC CGCATCCAGG TGGCGTGA
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Protein sequence | MIAPRDEHER TMAYAEVALR QIRSLRQDAL PRNYEIWYVY ATGHNAPLNK IINETLARSG KLSESDLEQI YDTYLSHGRT TDRIDKIGAR VVSEIEDVMS LITDALGLTA SFGDNLSGAN QKLSLAKDRA QVKAVVERLV ASTREMQQAN NALETRLSTS KLEINNLQHN LEAIRAESLT DPLTGLGNRK HFDRAVDDAV RCASASRQPL ALLMIDIDHF KSFNDTYGHL TGDQVLRLVG MSLKQSINGQ DIMARYGGEE FAVVLPNTGL RQAIAVAENI RQTVTSKELK KKSTGEILGR VTISVGVSTL RADDDTDSLI ERADSCLYAA KRNGRNRVIC EIDRDDLDHD RIQVA
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