| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2813 |
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| Symbol | |
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| ID | 3970118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3053695 |
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| End bp | 3055536 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637925925 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_532680 |
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| Protein GI | 90424310 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0113123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCTC CCGCCACCGC CATTCCGATC GAACAACCGC CGGCCTTTCT CGGCGTGGCG
CGCTCGGCGA CCGGCCGGGT GTGGCGCGAC CGGCTCGATC CGCGTGGCGC CGCGCGGGCG
CTGGCGATCG CGCAGCGCTA TCAGCTGCCG GAAATGCTGG CCCGGGTGCT GGCGGGCCGC
AATGTCGAGA TCGACGCGGT GGAGGACTTT CTCGACCCGA CGATCCGCAG GCTGCTGCCC
GACCCCTACA GCGTGACGCA GATGGAAGCC GCCGCCAAGC GGCTTGCCGA CGCCGTGCTC
GGAGCGGAGA CGGTGGCGAT CTTCGGCGAT TACGACGTCG ACGGCGCTAC CTCGGCGGCG
CTGCTGGCCT GGCATTTGCG GCATTGCGGG CTCGATCCGT TGATCCACAT TCCGGACCGC
ATCTTCGAGG GCTACGGCCC CAATGTCGAC GCGGTGCGGA TGCTGGCTTC GAGGGGCGCT
ACGCTCTTGA TCACGGTGGA TTGCGGCACC ACCAGCCTGG AGCCGCTCGC GGAGGCCAAG
CGGCTCGGCA TGAGCGTGGT GGTGATCGAT CATCACCAAT GCGGCGATGA GCTGCCGGTC
GTCGACGCGC TGGTCAATCC GAACCGACCG GACGATCTGT CCGGGCTGGG GCATCTCGCC
GCGGTCGGGC TGGTGTTCGT CACGCTGGTG GCACTCAATC GCGAATTGCG CGCGCGCGGT
TTCTGGACGT TGGAGCGGCC GCAGCCGGAG CTGCTGAACA TGCTGCATCA CGTGGCGCTC
GGCACCGTCG CCGACGTCGC GCCGTTGACC GGGCTGAACC GCGCCTTCGT CGCCAAGGGG
CTGATCGCGA TGCGGCGGCG CGACCATGTC GGCCACACCG CGCTGATGGA CATAGCAAGG
CTGAACGGCC CGCCCGACGC GTTTCACTTG GGTTTCCTGC TGGGGCCGCG GATCAACGCC
GGCGGCCGCA TCGGCCGCGC CGACCTCGGC GTGCGGCTGC TGCTGGAGAG CGATATTTCC
GAAGCCGCCA AGATCGCCGC CGAGCTCGAC CGGCTCAATG CCGAGCGCCG GGTGATCGAA
CAGATGGCCG AAGCCCAGGC CGAGGCTGAA GCGCTGGCGG CGCTCGGCTT CGAGGACAAG
GGCTCGGTGA TCGTTACCGC CTCGGAAGGC TGGCACCCCG GCGTGGTCGG CCTCGTCGCC
TCGCGGCTGA AGGAGAAATT TTCACGCCCC GCCTTTGCGA TCGCGCTGGA GCCGGGCGGC
ATCGGCACCG GAAGCGGCCG CTCGATTCCC GGCGTCGACC TCGGCAAAGC GGTGCGTCAG
GCGGTCAGCG ACGGGCTGCT GCTGAAAGGC GGCGGCCACG CCATGGCGGC GGGGGTCACG
CTGCGCAAGG AGAAGCTCGC CGAATTCCGC GCCTATATCG AGGCGGCGCT CGCCGCCGAC
GTCGCGCGGT CGCGCCACGC CAACGAGCTG TTCATCGACG GCGCGGTGTC AGCGCGCGCG
GTGACGCCGG ATCTGGTGGC GACGCTGAAC CGCGCCGGGC CGTTCGGCTC CGGCAATCCG
GAGCCGGTGC TGGCGCTGCC GTCGCATCAA TTGGTCTATG CCGACGAGGT CGGCCAGGCG
CATCTGCGGC TGCGCTTCAA ATCCGGCGAC GGCGCGATCG TCAACGGCAT CGCGTTTCGA
AGCGTCGGCC AGAAGCTCGG CAACGCGCTG CAGGAAAATC GCGGCCAGCC GCTGCACGTC
GCCGGCTGCC TCACGGTGGA TCGCTGGCAG GGCAACGAGC GGGTGCAGCT GCGCGTCACC
GACGTCGCGG TGCCGGATCC AGGGCCAGCG GTGATCCGGT AA
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| Protein sequence | MTPPATAIPI EQPPAFLGVA RSATGRVWRD RLDPRGAARA LAIAQRYQLP EMLARVLAGR
NVEIDAVEDF LDPTIRRLLP DPYSVTQMEA AAKRLADAVL GAETVAIFGD YDVDGATSAA
LLAWHLRHCG LDPLIHIPDR IFEGYGPNVD AVRMLASRGA TLLITVDCGT TSLEPLAEAK
RLGMSVVVID HHQCGDELPV VDALVNPNRP DDLSGLGHLA AVGLVFVTLV ALNRELRARG
FWTLERPQPE LLNMLHHVAL GTVADVAPLT GLNRAFVAKG LIAMRRRDHV GHTALMDIAR
LNGPPDAFHL GFLLGPRINA GGRIGRADLG VRLLLESDIS EAAKIAAELD RLNAERRVIE
QMAEAQAEAE ALAALGFEDK GSVIVTASEG WHPGVVGLVA SRLKEKFSRP AFAIALEPGG
IGTGSGRSIP GVDLGKAVRQ AVSDGLLLKG GGHAMAAGVT LRKEKLAEFR AYIEAALAAD
VARSRHANEL FIDGAVSARA VTPDLVATLN RAGPFGSGNP EPVLALPSHQ LVYADEVGQA
HLRLRFKSGD GAIVNGIAFR SVGQKLGNAL QENRGQPLHV AGCLTVDRWQ GNERVQLRVT
DVAVPDPGPA VIR
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