Gene RPC_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2798 
Symbol 
ID3970103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3040286 
End bp3041041 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID637925910 
ProductTetR family transcriptional regulator 
Protein accessionYP_532665 
Protein GI90424295 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.358212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAC GTACAGTATT TAAATCGGCG GAGTGTTCGT CGGCACCGAC GATGAGCGTC 
AACGGCGAAA CCGACGAGAC GAGGCGAATG GCGAGAGTTC GGACCGAAAC CAAGCGCGAC
GCGATTCTCG AGACGGCTGC TCAGGTGTTC CAGGAGCGCG GCCTCGAGGG GGCGTCGATG
TCGGAGATCG CCAAGCGGCT CGGCGGCTCG AAAGCGACGC TGTACGGCTA TTTTCCCTCC
AAGGAAGAGC TGTTCGTCCA CGTCGCCCTG CGGGTCGCCG GACAGCAGAT CCTGGTGATG
CTGAAAGGAT TGCAGGACCG CGCTGCGGAG CATCCCCGCA CGGTCCTGCT CGACGTCGGC
AAGGAGTTGG TCGGGCGCGT GCTGGCAGAG GACGCCACGA CCGCCTACCG CCTCGCCGTG
TCGTACGGCC GGGTCGGCAA TTTGGGCCGC ATCTTCTACG AAGCGGGTCC GGGAAAGGCG
ATCGAGGCCT TCACCCGCTA CTTCGAAGCC GCGACAGCCG CCGGACGGCT CGCGGTCGTC
GACATTGACG CCGCTGCGCA TCATCTGTTG GCTCTGCTTG AGTCCGAGAT TACTTACCGC
CGGACACTCC AGTTCGGCGA CGAGATCACC CGTGACGCGA TTGATAAGTC AGTCGGCAGA
GCCGTGGATG TCTTTTTGGC CGCCTACGTC GCAGATTCGC GATTGACGCC GCAGAAGCCA
AGCCGGCAGT CTCAAAGCGT CAAAAAAACC GCCTAG
 
Protein sequence
MTVRTVFKSA ECSSAPTMSV NGETDETRRM ARVRTETKRD AILETAAQVF QERGLEGASM 
SEIAKRLGGS KATLYGYFPS KEELFVHVAL RVAGQQILVM LKGLQDRAAE HPRTVLLDVG
KELVGRVLAE DATTAYRLAV SYGRVGNLGR IFYEAGPGKA IEAFTRYFEA ATAAGRLAVV
DIDAAAHHLL ALLESEITYR RTLQFGDEIT RDAIDKSVGR AVDVFLAAYV ADSRLTPQKP
SRQSQSVKKT A