| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2796 |
|---|
| Symbol | |
|---|
| ID | 3970101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3035885 |
|---|
| End bp | 3039064 |
|---|
| Gene Length | 3180 bp |
|---|
| Protein Length | 1059 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637925908 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_532663 |
|---|
| Protein GI | 90424293 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.963935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGAT TCAACCTTTC CGCCTGGGCG GTCGCCCACC CGACATTGAT GCTGTTCCTG
ATCCTCGTGA TCGGCTTAAC CGGCACTCTG TCGTATCAGA AGCTCGGCCG GGCCGAGGAC
CCGTCCTATA CCATCAAGGT CGCGGTGGTG ACGGCAAGTT GGCCGGGCGC CACTGCTGAG
GAAATGCAGT TTCAGGTCGC GGATCGGATC GAGAAGAAGC TGCAGGAACT ACCCTGGTTC
GACAAGGTGA CGACCTATTC GAAGCCGGGC TTCACCGCGG CCCAGGTCGA GTTTCGCGAC
ACCACTCCGC CGGCCCAGGT GCCCTGGCTG TTCTATCTGC TCCGGAAAAA GCTGGCAGAC
GTGAAGCCGG ATCTGCCGGA GGGGGTGGCG GGTCCCGAGG TCAACGATGA ATACGGCGAC
GTCGATTCCG TCGTCTATAT GTTGAGTTCG GACAGCGCCG ACTACGCGAC GATGAAGCGC
ATCGCCGAGC AGGTTCGACA GCGTCTGCTG AAAGTGCCGA ACGTCTCCAA GGTGACGATC
TACGGCACGC AGGACGAGCG CATCTTCGTC GACTTCGACC ACGTCAAGCT CGCCAATCTC
GGCATCTCGC CGCAGACGAT TTTTGCCAGC CTGGCCCGGC AGAACGATCT CGCGCCGGTC
GGGATGGTGC AGACCCGATC GACCCGCATT CCGTTGCGCG TCACCGGCGC CTTCGACGGG
GTGAGCGCGG TGGAGGAAAC GCCGGTGGCG GTCGCCGGCA CGGTGATCCG GCTCGGCGAC
ATCGCCACCG TATCCCGCGG TTACATTGAT CCACCGCAAT CGCTGGTGCG GCAACGCGGC
GTGCCGGCCC TGGCGATGGG CATCGCCATG CAGCGCGGCG CCAACATCCT AAAACTCGGC
GAGGACGTCG AGGCGGTGAT GGCCGGCATC GAGCGGGCTA TTCCGACCGG CCTCGGCTTC
GAGCGCGTCG CCAATCAGCC CGCCATCGTC CGCGAGGCGG TCGGCGACTT CATGCGGTCG
TTCGTGGAAG CGCTGGCGAT CGTCCTGCTG ATCAGTTTCG CGTCGCTGGG ATGGCGCACC
GGCATCGTGG TGGCGACGTC GGTCCCGCTG GTGCTCGGCA TCGTGTTTGC GGCGATGCTG
ATGATCGGCA TCGACCTGCA TCGAATCTCG CTCGGCGCGC TGATCATCGC GCTCGGCCTG
TTGGTGGACG ACGCCATCAT CTCGGTGGAG ATGATGATGG TGAAGATCGA GCAGGGCTTC
GATCGGGCGC GCGCGGCCTC CTTCGCCTGG CAGTCGTGCG CGGGGCCGAT GCTGAGCGGC
ACGCTGGTGA CGGCGGCCGG CTTCCTTCCG GTCGGCATGG CGGCCAGCGG CACCGGAGAA
TACGCCGGCA GCATCTTCTG GGTGGTCGGC ATCGCGCTGG TGGCGTCGTG GCTCGTCGCC
GTGGTGCTGA CGCCCTATCT CGGCTTCAAG TTGCTGCCGG CGCGATCTCA CCACGGCGAT
TCGGCGCTGG CGATCTACGA CAAGCCGGTG TATCGCCGAT TTCGAAGGTT GGTGGTTTGG
TGCGTCCGCT ATCGGCTCAT GGTGATCGGC GTGACGATCG CGGCCTTCGC ATTTTCGCTC
GTGGGATTCG GCAAGATCCA GCGACAGTTC TTCCCGACCT CGGACCGGAC GGAACTGTTC
GTCGAGCTTC GTCTGCCAGG TGGCAGCGCG CTCGAAACCA CCCTTGCGAT CGCGCAACAG
GCGGAAGCTC TGGTCGCCGC CGACGACGAC GTCGTCACCT GGAGCACCTA TGTCGGCAAG
GGGCCGCCGC GCTTCCTGCT GAACGTCAAT CCCGAACTGC CCAACGAGGC CTATGGCGAA
CTCGTCGTCG TCACCAAGGA CAGCGCGGCA CGCGAGCGGG TCAAGCGTCG GATCGAACTC
GCCGTCCGCG ACGGTGCGAT CGTCGGCGCG CGGGTGCGGC TGAAGCGGCT CGCCCATGGC
CCGCCGATCA AATTCCCGGT GCAATTTCGC ATCATCGGCG AGGATCCGAA CACGGTGCGC
TCGATCGCCT ACGAGGTCCG CGACGTCCTG CGCAACAATC CGGACGCCGT CGAGCCGCAG
CTGGACTGGA ACGAGCAGAT GCCGTCGATC CGGCTCCTGA TCGATCAGGA CCGGGCGAGG
GCGCTCGGCC TCGATCCGCA GGCGATCTCG CAGACGCTGC AGATGCTGGT GACCGGAACC
ACGGTGACCA CGGTGCGCGA TCGCACCGAG AAGGTCGCCG TGGTGGCGCG GGCGATCGCC
GCCCAACGCA ACGACCTCGG CGCCATCGAC GATCTGACCG TGCTGTCGCG CAACGGCGTG
CCGGTGCCGT TGTCGCAAGT CGCGCACGTC GAACAAGGCC ACGAAGAAGC GATCCAGTGG
CGGCGCGACC GCGACATGGC GATCACGGTC AGAAGCGACG TGCGCGACGG CGTTCAGGCG
CCTTACGTGT CGTCGGTGGT GTGGACGGCG CTGGCCGATC TGAGGAGCCG GCTTCCCGAG
GGCTATCGAA TCGAGCTCGG CGGCGCGATC GAGGATTCCG GAAAGGCCAA CGGCGCGCTG
GTCGCGGTGA TGCCGGCGAT GCTGATCGTC ATGCTCATGG TGCTGATGAT CCAGCTGCAG
AGCTTCTCCA GGCTTCTGAT CGTTCTCCTG ACGGCCCCGT TGGGACTGAT CGGCGCGACC
GCCGGTCTGC TGGTGTCCGG AAAGCCGTTC GGCTTCGTCG CTCTGCTCGG TCTGATCGCG
CTGGCCGGCA TGATCATCCG CAACGCGGTG ATCCTGGTCG ATCAGATCGA GCAGGACGTC
GCCGCGGGCC GCGCACGCGG CGAGGCGATC ATCGAGGCCA CGGTCCGGCG CGCCCGCCCG
GTGGTGTTGA CCGCGCTCAC CGCAGTGCTG GCGATGATTC CACTGAGCCG ATCGAGTTTC
TGGGGACCCA TGGCGGTCGC GATCATGGGG GGACTGCTGG TGGCGACGGC ATTGACGCTG
CTGTTCCTGC CGGCGCTCTA TGCGTTCTGG TACCGCCGCT CGCTCGAGCC GGCAGTCCTG
CACCCGTTGC GCGACAGCGG CCGTGCCGAC TTCGCCGGAT CGGTGCGGGA TTTATTGTCA
GCGCTTCGGG CCAAAACAGT GAGAACGGTT TCGCCGAGAT CTTCCCAACA GGACCGCTAG
|
|---|
| Protein sequence | MSRFNLSAWA VAHPTLMLFL ILVIGLTGTL SYQKLGRAED PSYTIKVAVV TASWPGATAE
EMQFQVADRI EKKLQELPWF DKVTTYSKPG FTAAQVEFRD TTPPAQVPWL FYLLRKKLAD
VKPDLPEGVA GPEVNDEYGD VDSVVYMLSS DSADYATMKR IAEQVRQRLL KVPNVSKVTI
YGTQDERIFV DFDHVKLANL GISPQTIFAS LARQNDLAPV GMVQTRSTRI PLRVTGAFDG
VSAVEETPVA VAGTVIRLGD IATVSRGYID PPQSLVRQRG VPALAMGIAM QRGANILKLG
EDVEAVMAGI ERAIPTGLGF ERVANQPAIV REAVGDFMRS FVEALAIVLL ISFASLGWRT
GIVVATSVPL VLGIVFAAML MIGIDLHRIS LGALIIALGL LVDDAIISVE MMMVKIEQGF
DRARAASFAW QSCAGPMLSG TLVTAAGFLP VGMAASGTGE YAGSIFWVVG IALVASWLVA
VVLTPYLGFK LLPARSHHGD SALAIYDKPV YRRFRRLVVW CVRYRLMVIG VTIAAFAFSL
VGFGKIQRQF FPTSDRTELF VELRLPGGSA LETTLAIAQQ AEALVAADDD VVTWSTYVGK
GPPRFLLNVN PELPNEAYGE LVVVTKDSAA RERVKRRIEL AVRDGAIVGA RVRLKRLAHG
PPIKFPVQFR IIGEDPNTVR SIAYEVRDVL RNNPDAVEPQ LDWNEQMPSI RLLIDQDRAR
ALGLDPQAIS QTLQMLVTGT TVTTVRDRTE KVAVVARAIA AQRNDLGAID DLTVLSRNGV
PVPLSQVAHV EQGHEEAIQW RRDRDMAITV RSDVRDGVQA PYVSSVVWTA LADLRSRLPE
GYRIELGGAI EDSGKANGAL VAVMPAMLIV MLMVLMIQLQ SFSRLLIVLL TAPLGLIGAT
AGLLVSGKPF GFVALLGLIA LAGMIIRNAV ILVDQIEQDV AAGRARGEAI IEATVRRARP
VVLTALTAVL AMIPLSRSSF WGPMAVAIMG GLLVATALTL LFLPALYAFW YRRSLEPAVL
HPLRDSGRAD FAGSVRDLLS ALRAKTVRTV SPRSSQQDR
|
|---|
| |