| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2781 |
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| Symbol | |
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| ID | 3970121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3018318 |
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| End bp | 3020321 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925891 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_532648 |
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| Protein GI | 90424278 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0940378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.476201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGGT CCGCGCTGTA CCGTCGGTTT CGCACGCTGC TGATCGCCAA CCGCGGCGAG
ATCGCCTGCC GGGTGATCCG AACCGCGCGC GCCATGGGGC TGCGCACCGT GGCGGTGTAT
TCCGAAGCCG ACCGCGGTGC ATTGCATGTG GCTGAGGCCG ACGAGGCGGT GCTGATCGGC
GAGGCGCGGG CGCGCGACAG CTATCTCGAC ATCGCGCGCG TCATCGCTGT CGCCAAGCAG
AGCGGCGCCG AAGCGATCCA TCCCGGCTAC GGCTTTCTGT CGGAGAGCGC GGAGTTCGCG
CAGGCCTGCG CCGATGCTGG AATCGTGTTC GTAGGCCCGA CCGCCGCGAT GATCACCGCG
ATGGGCTCCA AGTCCGGTTC GAAGCAGCTG ATGGAACAAG CCGGTGTACC GCTGGTGCCG
GGTTTTCACG GCGAAGCCCA GGACGAGGCC ACGCTGGCGG ACGCAGCTAA CAGCATCGGC
TATCCGGTGC TGGTGAAAGC CTCGGCGGGC GGCGGCGGCC GCGGCATGCG GGTAGTGCAC
ACCGCAAATG AACTCAGCGC CGCGATCGTC AGCGCCAAGC GCGAGGCGAA AGCCGCGTTC
GGCGACGACC GCATGCTGAT CGAGAGATAC GTTACAAACC CCCGGCACAT CGAGGTGCAG
GTGGTCGGCG ACAGCCACGG CAACCTGGTG TCGCTGTTCG AGCGCGAATG CACTTTGCAG
CGGCGGCACC AGAAGGTGAT CGAGGAGGCG CCGTCGCCGA CCTTGTCGCC GGCGCAGCGC
GAGACGGTCT GCGCCGCGGC GCGCAAGGCC GCCGCCGCGG TGAACTACGT CGGCGCCGGC
ACCATCGAAT TCGTCTCCGA CGGCCGCGAC GTCTTCTTCA TCGAGATGAA CACGCGACTG
CAGGTCGAGC ATCCGGTCAC CGAGTTGATC ACCGGCATCG ACCTGGTCGA ATGGCAACTC
CGTGTCGCGT TCGGCGAGAA GTTGCCGCTC GCGCAGGACG AGATCAAGCT GAACGGCCAC
GCCATCGAGG CGCGGGTCTA TGCGGAGAAT CCGCAGAAGA ACTTCATGCC CTCGGTCGGC
ACCATCAAGA CCTGGCGCAC GCCGCCGCAG ACCCACGGCT TGCGGATCGA CGCCGGCTAT
CGGCAGGGCG ATAGCGTGTC GCCCTATTAC GACGCGATGC TGGCCAAGGT GATCGCCTTC
GCGCCGAGCC GCGACGCCGC GCTCGACCGG CTCGCGCGCG GGCTCGACGA CACCGACATC
CGCGGCGTGG TCACCAATAC GGCCTTCCTC GCCGCGCTGC TGACGCATCC CGACGTGCGC
GCCAACGCGA TCGATACCGG CTTCATCGCG CGCGAGTTGG CGGCGCTGAC GCCGGCGGCG
GCGGAGCCCG GCGATCTCGA ACTGTGTGCG GCGGTGGCGG CGATCCTGGT TGAGGAAGAC
AAGGCCGTGC ATCGCGAGCC GGCCTCGCCA TGGCGGACCG CGGGCTGGAT GCCGGTCGGT
CGCCGCGCCC GGGTGTTCGC GTTCCGCCAC GGCGCCGCCG AGCACCGGGT GACGCTGCGC
TACGGCAGCG GGCCGGCGGA GCTTGCGATC GGCGATCGGA CTTTTGACTT CAGCACCGCC
GCGCGTGACG ACGGCGGCTT CGACCTGACG CTGGACGGCG CGCGCAGCCA TGTCGTTGCA
GTGATCGAGG GCCACGAGCT CTATCTGCGC AGCCGCAACG GCCGCTTCGA CCTGCATTGG
GTCGATCCGT TCGGCGGCGA CGACGAGGAG CATGTCGGCG AGGACCGCAT CGTGGCGCCG
CTGCCGGGCA CCGTGGTGGC GCTGTTGGCC GAGCAGGGCG CGACCCTAGA GAAGGGCGCG
GCGATCCTCA CGCTGGAAGT GATGAAGATG GAGCAGACGC TGCGCGCGCC GTTTGCCGGC
GTGCTGACCC ATCTGAAATG CAAGGTCGGC GACATCGTCC AGGAAGGCGT CGAACTCGCC
GAGATCGAGC CTTCAGCCGC GTGA
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| Protein sequence | MARSALYRRF RTLLIANRGE IACRVIRTAR AMGLRTVAVY SEADRGALHV AEADEAVLIG
EARARDSYLD IARVIAVAKQ SGAEAIHPGY GFLSESAEFA QACADAGIVF VGPTAAMITA
MGSKSGSKQL MEQAGVPLVP GFHGEAQDEA TLADAANSIG YPVLVKASAG GGGRGMRVVH
TANELSAAIV SAKREAKAAF GDDRMLIERY VTNPRHIEVQ VVGDSHGNLV SLFERECTLQ
RRHQKVIEEA PSPTLSPAQR ETVCAAARKA AAAVNYVGAG TIEFVSDGRD VFFIEMNTRL
QVEHPVTELI TGIDLVEWQL RVAFGEKLPL AQDEIKLNGH AIEARVYAEN PQKNFMPSVG
TIKTWRTPPQ THGLRIDAGY RQGDSVSPYY DAMLAKVIAF APSRDAALDR LARGLDDTDI
RGVVTNTAFL AALLTHPDVR ANAIDTGFIA RELAALTPAA AEPGDLELCA AVAAILVEED
KAVHREPASP WRTAGWMPVG RRARVFAFRH GAAEHRVTLR YGSGPAELAI GDRTFDFSTA
ARDDGGFDLT LDGARSHVVA VIEGHELYLR SRNGRFDLHW VDPFGGDDEE HVGEDRIVAP
LPGTVVALLA EQGATLEKGA AILTLEVMKM EQTLRAPFAG VLTHLKCKVG DIVQEGVELA
EIEPSAA
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