Gene RPC_2744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2744 
Symbol 
ID3970161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2982129 
End bp2983847 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content66% 
IMG OID637925854 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_532611 
Protein GI90424241 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.696609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.585687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGC TTCCCACTGC CGCTGCCGGG TCCCCCGCGC CACGCGCAAA AACCCTCGGT 
CTTGCGGCTC GGATCGTGCT GCTCTCGGTG TCGGGAATTC TGGCATTGGG TGTCTGCGTC
ACCAGCGTCG CCAAATACGT CCTGGAGCGA GGCGCCAGCG ACGCCGCGCT GGAGCGGGTC
GAGACCAATA TGCGGGTGGC CTGGGACGTG CTGCACGCCC ATGGCGGCAA CTACAGCATC
AGCGACGGCA AATTGAAGGT GGGCGGCCAC GTCCTGAACG ACGACGTCGC GGCCGTGGAC
AAGGTCAAGG CGCTGGTCGG CGGCACCTGC ACGATCTTCA TGAAGGACCA GCGGGTCGCC
ACCAATGTGA TGAAGCCGGA CGGCTTGCGC GCGGTGGGGA CGTCGTTGGC GCGCAGCGAG
GCCTCTGCGG CGATCTTCGA CCGCAAAGCC TCGTATCGCG GCGAAGTCGA GATCCTCAAC
GAGCCGTATA TGACCGCCTA TGATCCGATC CTCGGCGCCA ACGGCGAGGT GCTCGGCATC
CTCTATGTCG GGATCAAGAA GGCCGAATTC CTCAAACCGG CCAAGGAAAC CTTCTGGACC
ATCATCTACG CGACGCTCGG AGTGGCGGTG CTGGCGATGA TCGTCAGCTT TTGGGTGGCG
CGCGGCAGCG TGGTTCGACC GCTGAAATCG TCGATCGCCA CGATGAACCG GCTCGCCGAA
GGCGATCTCA CGGTCGACAC GCCGGCACCG CATCGCGGCG ACGAGATCGG CGACATCATG
GCGGCGCTGG CGGTGTTCAA GAGCAACGGA TTGCAAATCG AGCGCATGAA GCGCGAACAA
CAGGAGGCGG AGGCCCGCAG CGTCGCGCAG CGCAAGCACG ATATGCAACG CCTTGCCGAC
GACTTCGAAG GCGCGGTCGG CCAGATTATC GAGACCGTCT CCTCGGCATC GAGCCAACTC
GAGGCCTCCG CCGGCAGCCT GTCGGTGAAC GCCGATCGCT CGGAAAAATT GGCCACGGTG
GTGGCGGCGG CCTCTGAAGA GGCCTCCACC AATGTGCAGG CGGTGGCCTC GGCCACCGAA
CAGATGTCCT CCTCGGTCAA CGAGATCAGC CGCCGGGTGC AGGATTCCGC GCGGATCGCC
GGCGAGGCGG TGGCGCAGGC GGTCAAGACC AACGACGACG TCGGCGAATT GTCCCGGATG
GCGGCGCGGA TCGGCGACGT CGTCGAACTG ATCAGCAGCA TCGCCGGGCA GACCAATCTG
TTGGCGCTCA ACGCCACCAT CGAAGCGGCG CGCGCCGGCG ACGCCGGCCG CGGCTTTGCG
GTGGTCGCCT CCGAAGTCAA AGCGCTGGCC GAGCAGACCG CCAAGGCCAC CGGCGAGATC
GGTCAGCAGA TCTCCGGGAT TCAGAGCGCC ACCCAGCGGT CGGTCGGCGC CATCGGACAG
ATCAGCACGA CCATCAGCCA GATGTCGGAG ATCGCCTCGA CCATCGCCTC GGCGGTGGAA
GAGCAGGGCG CCGCGACCCA AGAGATTTCC CGCAACGTCC AGCAGGCGGC GATCGGAACC
CAGGAGGTCA GCTCCAACAT CGCCGACGTG CAGCGCGGCG CATCCGAGAC CGGGCTGGCT
TCCGCGCAAG TGCACAGCGC GGCGCAGTCG CTCTCGGCCG AAAGCACCCG CCTGAAGCAG
GAGGTCGGTA AGTTCTTGCA CTCGGTACGC GGGGCGTAG
 
Protein sequence
MSSLPTAAAG SPAPRAKTLG LAARIVLLSV SGILALGVCV TSVAKYVLER GASDAALERV 
ETNMRVAWDV LHAHGGNYSI SDGKLKVGGH VLNDDVAAVD KVKALVGGTC TIFMKDQRVA
TNVMKPDGLR AVGTSLARSE ASAAIFDRKA SYRGEVEILN EPYMTAYDPI LGANGEVLGI
LYVGIKKAEF LKPAKETFWT IIYATLGVAV LAMIVSFWVA RGSVVRPLKS SIATMNRLAE
GDLTVDTPAP HRGDEIGDIM AALAVFKSNG LQIERMKREQ QEAEARSVAQ RKHDMQRLAD
DFEGAVGQII ETVSSASSQL EASAGSLSVN ADRSEKLATV VAAASEEAST NVQAVASATE
QMSSSVNEIS RRVQDSARIA GEAVAQAVKT NDDVGELSRM AARIGDVVEL ISSIAGQTNL
LALNATIEAA RAGDAGRGFA VVASEVKALA EQTAKATGEI GQQISGIQSA TQRSVGAIGQ
ISTTISQMSE IASTIASAVE EQGAATQEIS RNVQQAAIGT QEVSSNIADV QRGASETGLA
SAQVHSAAQS LSAESTRLKQ EVGKFLHSVR GA