| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2684 |
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| Symbol | |
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| ID | 3970354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2913176 |
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| End bp | 2915404 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925795 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_532552 |
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| Protein GI | 90424182 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0586325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTCG TGTTCTGGCG TAAGGGCGGC AAGCAGATTG CGGCCGCCAC GGTCGCCCCC
GAAGCCTCGC CGACTCCCGC AAAGCCCGCG GCGCCGGCCG CGCTCGCGGC AGAGCCGGCG
GCCCCGCTCG GCGACATCGA CGTCCGCGCC ATTCTGCAGG CGCTGGGCCG CAAGAAGCAT
CTGATCATCG CGCCGACGCT GCTTGCGCTG GTGGTGTCGC TGGCGATCGT CAACATGATC
ACCCCGCGCT ACAAATCCGA AGCCCGCATC CTGATCGACG GCCGCGAGAA CGTGTTCCTG
CGGCCGAGCG GCGAGCGCAA CGAGGAACGC ACCGCGCTCG ATCCCGAAGC GGTCACCAGC
CAGGTGCAGC TGTTGCTGTC GCGCGATCTG GCGCGCGAGA TCATCAAGAA GAACAAGCTC
GCCGAGCGCC CGGAATTCGA TCCGGTGCTG CAAGGGCTGT CGCCGTTGAA GTCGCTGCTG
GCGCTGATCG GGATCGGCCG CGACCCGTTC TCGATGACGC CGGAAGAGCG CGTGCTGGAC
GCCTATTTCG AACGGCTGAC CGCCTATGCG GTGGATAAAT CCCGCGTCGT GGTGATCGAA
TTCCAGTCGC GCGATCCGGA GCTCGCCGCA CGGGTCGCCA ATTCGATCGC CGAGGGCTAT
CTGGTGCTGC AGCAGGGCGC GCGCCAGGAG CAGGCCAAGT CGGCCGGGCA GTGGCTGTCC
GGCGAAATCG AAAACCTGCG CAAGAAGGTG GCGGAAGCGG AATCCAAGGT CGAGGATTTC
CGCTCCAAGT CCAGCCTGTT CATCGGCACC AACAACACCT CGCTGTCGAA TCAGCAGATG
GGCGAACTCA ACACCCAGCT CAACAACGCC CGCGCCTTGA AGTCGGATGC CGAATCCAAG
GCCCGACTGA TCCGCGAGAT GTTGCAGAGC GGCAAGCCGA TCGAAGCCTC CGAAGTGTTG
AACTCCGAAC TGACCCGGCG GTTGTCGGAG CAGCGCGTCA CGCTGCGCGC GCAGCTCGCC
GAGCAATCCT CGACGCTGCT CGACGGCCAT CCGCGGATCA AGGAATTGCG GGCGCAGCTC
GGCGATCTCG ACCGGCAGCT GCGCGAGGAG GCCAGCAAGA TCTCGCGCTC GCTCGACAAT
GACGCCCGCA TCGCCGGCGG CCGCGTCGAA GGCCTGATCG CCAGCCTCGA TCAGCTCAAG
AAGCAGGCGT CGTCGTCGAA CGGCCAGGAC GTGCAGCTGC GTGCGCTGGA GCGCGAAGCC
AAGGCGCAGC GCGACCTGCT GGAATCCTAC CTGGCCAAGT TCCGCGAAGC CACCACGCGC
GAGAGCATCG ATTCGGCGCC GGCCGACGGC CGGATCATTT CCCGCGCCAT CGTCTCCAAC
ACGCCGGCTT ATCCGAAGAA ATTGCCGGTC GTGCTGATCG CCACGCTGGC GACGCTGCTC
CTCACCTCGG GCAGCATCGT GACCGGCGAA TTGCTGCGAC TGAGCGCGCC GCGCGCCAGC
GCCGCGGCGC TCGACCCGGC GACGTCGCCG GCGCGGCGCA TCGAACCGGT CGCACCGATG
GCGGCGCCGG CCGCGCCGCC GCCGCTGGCG CCGTCGTTGC CCGACACCCA TCCCGAACTG
TCGGCCGCGG TCGGCGAGCT GGAAACGCTC GCCGAGGAAT TGCGAAGTGC CGGCGAAGCG
GCGCGCAAGG TCACCGTGCT CGGCACCGGG CAAAGCGAAA GCGTGACGCT GACCGCGCTG
ACTCTGGCGC GGCTGTTGGC GCGCAGCGCC AAGGTGGTGC TGGTGGATCT GTCGGCGTCC
TCGCCGACGC TGGCCGCGGT GTCGGCCGAT CCCGAGGCGC CGGGGCTTGC CGAGCTGATG
CTGGGCGAGG CGTCGTTCGG CGAGATCATC AGCAAGGATC GGTTGTCGCG GCTGCATCTG
GTCAGCGCCG GCAAGCCGGG CTTCGATCGC GCGCTGCTGT TGTCGCCGCG GCTGAACCTC
GCGCTCGACG CGTTGCTGCG GGTCTACGAC CACGTGCTGC TCGACGCCGG CACCGCCACC
GACCTGCCGG CGGAATTGCT CACCGCGCAG GCCCGCGCGC TGCTGGTGCC GGCGCCGTCG
ATGAGCCCCG CGGCCCGCAT CGAAATGTGC CAGCAGCTGG AAAGCGTCGG CTTCGCCAAG
GTCACGCTGC TGCAGCGCGC CTCGCCGCAG GACAATGAGG CCGAGCGATC CGGGACCGTG
GCGGCGTAG
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| Protein sequence | MRFVFWRKGG KQIAAATVAP EASPTPAKPA APAALAAEPA APLGDIDVRA ILQALGRKKH
LIIAPTLLAL VVSLAIVNMI TPRYKSEARI LIDGRENVFL RPSGERNEER TALDPEAVTS
QVQLLLSRDL AREIIKKNKL AERPEFDPVL QGLSPLKSLL ALIGIGRDPF SMTPEERVLD
AYFERLTAYA VDKSRVVVIE FQSRDPELAA RVANSIAEGY LVLQQGARQE QAKSAGQWLS
GEIENLRKKV AEAESKVEDF RSKSSLFIGT NNTSLSNQQM GELNTQLNNA RALKSDAESK
ARLIREMLQS GKPIEASEVL NSELTRRLSE QRVTLRAQLA EQSSTLLDGH PRIKELRAQL
GDLDRQLREE ASKISRSLDN DARIAGGRVE GLIASLDQLK KQASSSNGQD VQLRALEREA
KAQRDLLESY LAKFREATTR ESIDSAPADG RIISRAIVSN TPAYPKKLPV VLIATLATLL
LTSGSIVTGE LLRLSAPRAS AAALDPATSP ARRIEPVAPM AAPAAPPPLA PSLPDTHPEL
SAAVGELETL AEELRSAGEA ARKVTVLGTG QSESVTLTAL TLARLLARSA KVVLVDLSAS
SPTLAAVSAD PEAPGLAELM LGEASFGEII SKDRLSRLHL VSAGKPGFDR ALLLSPRLNL
ALDALLRVYD HVLLDAGTAT DLPAELLTAQ ARALLVPAPS MSPAARIEMC QQLESVGFAK
VTLLQRASPQ DNEAERSGTV AA
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