Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2629 |
Symbol | |
ID | 3973038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2861547 |
End bp | 2862506 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637925740 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_532498 |
Protein GI | 90424128 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.121971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTGCT TTGAAAATAG TCAGGCGCGG CGTGTTCTTT CGAGGCCGCG CCGAGTCAGG AGAACAGCTT TGGCCACCAC CACCGCATTT CGGGGCTCTT TCACCGCCCT GGTCACGCCT TTCAAGAATG GTTCGCTCGA CGAAGAGGCG TTTCGCAAGC TGGTGGACTG GCAGATTTCC GAAGGAACCG CCGGCCTGGT GCCGGTCGGC ACCACCGGCG AAAGCCCGAC GCTCAGCCAT GCCGAGCACC ACAAGGTGGT GGAATGGTGC GTCCAGGAGG CCAAGGGCCG GGTCCCGGTG ATCGCCGGAG CCGGCTCGAA TTCCACCAAG GAAGCCGTCG AACTGGCCCA GCACGCCGAA GCCGCGGGCG CCGACGCGGT GCTGGTGGTG ACGCCGTATT ACAACAAGCC GACCCAGGAG GGCATGTATC TGCACTTCAA GGCGGTGAAC GATGCGATCG GCATTCCGAT CATCATCTAC AACATCCCGC CGCGCTCGGT GGTCGACATG TCGGTCGACA CCATGACCAG GCTTTACGAA TTGAAGAACA TCGCCGGCGT CAAGGACGCC ACCGCCAATC TTAGCCGGGT GTCGCAGCAG CGCCACGCCA TGGGGCCGGA TTTCATCCAG CTTTCCGGCG AGGACATGAC CGCGCTGGCC TATATGGCGG CGGGCGGCCA TGGCTGCATT TCGGTGGTGT CGAACGTGGC GCCGAAGCCC TGCTCGGACC TGATGATCGC CGTCGCCAAG GGCGACTATG CCGCCGCGCT GAAGATCCAG GACCGGCTGG TGCCGCTGCA CGACGCGGTG TTCAAGGAGC CGGGCGTCTC CGGCGCCAAG CACGGGCTGG CGCTGCTCGG CCGCATCCAG GAAGAGGTGC GGCTGCCGCT GATCCCGGTC ACCGAGCCGA CCCGTGCGGT GATCCGCAGC GCCATGATCC ACGCCGGGCT GATCAACTAG
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Protein sequence | MNCFENSQAR RVLSRPRRVR RTALATTTAF RGSFTALVTP FKNGSLDEEA FRKLVDWQIS EGTAGLVPVG TTGESPTLSH AEHHKVVEWC VQEAKGRVPV IAGAGSNSTK EAVELAQHAE AAGADAVLVV TPYYNKPTQE GMYLHFKAVN DAIGIPIIIY NIPPRSVVDM SVDTMTRLYE LKNIAGVKDA TANLSRVSQQ RHAMGPDFIQ LSGEDMTALA YMAAGGHGCI SVVSNVAPKP CSDLMIAVAK GDYAAALKIQ DRLVPLHDAV FKEPGVSGAK HGLALLGRIQ EEVRLPLIPV TEPTRAVIRS AMIHAGLIN
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