Gene RPC_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2584 
Symbol 
ID3970923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2807631 
End bp2810414 
Gene Length2784 bp 
Protein Length927 aa 
Translation table11 
GC content65% 
IMG OID637925694 
ProductDNA gyrase subunit A 
Protein accessionYP_532453 
Protein GI90424083 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.216203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.308753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGACA CCGACGACAA CAAACCTGGG GAGCCGCCGG CGCCCTCGGA TATCCGCCCC 
GTTTCAATTC TCGACGAGAT GAAACGCAGC TACCTCGATT ACGCGATGAG CGTGATCGTG
GCCCGCGCGT TGCCGGACGC CCGCGACGGC TTGAAGCCGG TGCACCGGCG CATTCTCTAC
GCGATGTACG AGAACGGCTT CGAGTGGAAC AAGCCGTATC GCAAGTCGGC GCGTACCGTC
GGCGACGTCA TCGGTAAGTA TCACCCGCAC GGCGACCAGT CTGTCTATGA CGCCATGGTC
CGGATGGCGC AGGACTTCTC GATGCGCGTG CCGCTGATCG ACGGCCAGGG CAATTTCGGT
TCGGTCGACG GCGATTCCGC GGCCGCGATG CGGTACACCG AGTCCCGGCT GACCAAGATC
GCGCAGCTGT TGCTCGACGA TCTCGACAAG GACACCGTCG ACTATCAGGA CAACTATGAC
GGCTCGTTCC GCGAGCCCCG GGTGCTGCCT GCGAAATTCC CCAATCTGTT GGTCAACGGC
GCCGGCGGCA TCGCCGTCGG CATGGCGACC AACATCCCGC CGCACAATCT CGGCGAGGTG
ATCGACGCCT GCGTAGCGCT GATCGACGAT CCTGCGCTCA GCATCGACGA TCTCACCAAG
ATCGTGCCGG GTCCGGATTT CCCGACCGGC GGCATCATTT TGGGCCGCGC CGGCATCCGG
CTGGCCTATC ACACCGGCCG CGGCTCGATC GTGATGCGCG GCAAGGTCGC CATTGAACCG
ACCCGCAAGG ATCGCGAAGC GATCATCATC TCGGAAATTC CCTACCAGGT GAACAAGGCC
ACCATGGTGG AGCGCATCGC CGAACTGGTG CGCGAGAAGA AGATCGAAGG TATCTCCGAT
CTGCGCGACG AATCCGACCG CGACGGTTTT CGCGTGGTGA TCGAATTGCG GCGGGATGCG
GTGCCCGACG TGGTGCTGAA TCAGCTGTAT CGCTTCACGC CGCTGCAGAC CAATTTCGGC
GCCAACATGG TGGCGCTCGA TGCCGGCCGT CCGCAGCTGA TGAACCTGAA GGATCTATTG
CGGCTGTTCG TGGCGTTCCG CGAACAGGTG GTGACCCGCC GCACCAAATT CCTGCTCAAC
AAGGCGCGCG ACCGCGCCCA TGTGCTGGTC GGCCTCGCCA TCGCGGTCGC CAATATCGAC
GAGATCATCC GGGTGATCCG CACCTCGCCC GATCCCGCCA CCGCGCGCGA CACCTTGATG
GCGCGCGATT GGGAGGCCAA GGACGTCGCG GCGATGATCA CGCTGATCGA CGATCCGCGG
CATCGGCTGA ATGCCGACGG CACCGCGCGG CTGTCGTTCG AGCAGGCCAA GGCGATCCTC
GATCTGCGGC TGGCGCGCCT GACCGCGTTG GGCCGCGAGG AAATTTCCGA AGAGCTCGAC
AAGCTGGCGA TCGAGATCGC CGACTACCTG GAGATCTTGC GGTCCCGTGC TCGGGTGCAG
ACCATCATCA AGGAAGAACT TGCGGCGGTG AAGGCGGAAT TCGCCACGCC GCGCAAGACC
ACCATCATCG AGCAGGAAGG CGAGGTCGAA GACGAAGACC TGATCCAGCG CGAGGACATG
GTGGTGACGG TGTCGCACGC CGGCTACGTC AAGCGGGTGC CGCTGTCGAC CTATCGGGCG
CAGCGCCGCG GCGGCAAGGG CCGCTCCGGC ATGCAGACCC GCGAGGAGGA CTTTGTCAGC
CGGCTGTTCG TCGCCTCGAC GCATACGCCG GTGCTGTTCT TCTCGTCGCG CGGCCAGGTC
TACAAGGAAA AGGTCTGGCG GTTGCCGATC GCGCCGCCGA ACGGCCGCGG CAAGGCCTTG
ATCAACATCC TGCCGCTGGA GCAGGGCGAG CGCATCACCA CCATCATGCC GCTGCCGGAG
GATGAATCCT CCTGGGCCGA GCTCGACGTG ATGTTCGCCA CCACTCGCGG CACCGTCCGC
CGCAACAAGC TGTCGGACTT CGTCGATGTG CGCCGTTCCG GCATCATCGC GATGAAGCTG
GACGAGGGCG AGGCGATCGT CGACGTTCAG ATCTGCACCG ATCGCGACGA CGTGCTGCTG
ACCGCCGCCG GCGGCCAGTG CATCCGTTTC GCGGTGACCG ACGTCCGCGT GTTCCAGAGC
CGCGCCTCGA TGGGCGTGCG CGGCATGGCG CTCGCCAATG GCGATCAGGT GATCTCGCTG
ACCATCCTGC GGCATTTCGA TGCCAACCCG GCCGAACGCT CCACCTATCT GAAGCAATCC
GGCGCGATTC GCCGCGCCGC CACCGGCGAA GAGGCCGAGG CGGTCGAGGG CAGCGAATTG
GCGGCGGAAG TCGCCGACGC CGAGCCGGAG GAGGTCGACG CGATCGCCTC GCTCAGTCCG
GATCGCTACG CCGAGATGTC GGCTAACGAG CAGTTCGTGC TGACGCTGAG CGAGAACGGT
TTCGGCAAGC GGACCTCGTC GTTCGAGTAC CGCACCACCG GCCGCGGCGG CAAAGGCATC
GTCGCGATGG CGGTGAACGC GCGCAACGGC AAGCTGGTGG CCTCGTTCCC GGTGGAGGAG
GAAGATCAGA TCATGCTGGT GACCGACAAG GGGCAATTGA TCCGCTGCCC GGTCGGCGGC
ATCCGCATCG TCGGCCGCTC CACCCAGGGC GTCACGGTGT TCAACACCGC CGAGGACGAG
CACGTGGTCT CGGTCGAGCG CATCGGTGAA GACACCGAGA ACGGCAACGG CAACGGCCAT
GACAACGGGC AGGACGGCGG CTGA
 
Protein sequence
MADTDDNKPG EPPAPSDIRP VSILDEMKRS YLDYAMSVIV ARALPDARDG LKPVHRRILY 
AMYENGFEWN KPYRKSARTV GDVIGKYHPH GDQSVYDAMV RMAQDFSMRV PLIDGQGNFG
SVDGDSAAAM RYTESRLTKI AQLLLDDLDK DTVDYQDNYD GSFREPRVLP AKFPNLLVNG
AGGIAVGMAT NIPPHNLGEV IDACVALIDD PALSIDDLTK IVPGPDFPTG GIILGRAGIR
LAYHTGRGSI VMRGKVAIEP TRKDREAIII SEIPYQVNKA TMVERIAELV REKKIEGISD
LRDESDRDGF RVVIELRRDA VPDVVLNQLY RFTPLQTNFG ANMVALDAGR PQLMNLKDLL
RLFVAFREQV VTRRTKFLLN KARDRAHVLV GLAIAVANID EIIRVIRTSP DPATARDTLM
ARDWEAKDVA AMITLIDDPR HRLNADGTAR LSFEQAKAIL DLRLARLTAL GREEISEELD
KLAIEIADYL EILRSRARVQ TIIKEELAAV KAEFATPRKT TIIEQEGEVE DEDLIQREDM
VVTVSHAGYV KRVPLSTYRA QRRGGKGRSG MQTREEDFVS RLFVASTHTP VLFFSSRGQV
YKEKVWRLPI APPNGRGKAL INILPLEQGE RITTIMPLPE DESSWAELDV MFATTRGTVR
RNKLSDFVDV RRSGIIAMKL DEGEAIVDVQ ICTDRDDVLL TAAGGQCIRF AVTDVRVFQS
RASMGVRGMA LANGDQVISL TILRHFDANP AERSTYLKQS GAIRRAATGE EAEAVEGSEL
AAEVADAEPE EVDAIASLSP DRYAEMSANE QFVLTLSENG FGKRTSSFEY RTTGRGGKGI
VAMAVNARNG KLVASFPVEE EDQIMLVTDK GQLIRCPVGG IRIVGRSTQG VTVFNTAEDE
HVVSVERIGE DTENGNGNGH DNGQDGG