| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2579 |
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| Symbol | |
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| ID | 3970918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2800801 |
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| End bp | 2803086 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925689 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_532448 |
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| Protein GI | 90424078 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.838184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.345494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG CAGATACGGC GGCCCCATCT TCCGAACCGC ACAAGGCAGA ACCGCGCAGG
CGCCGGCTGC ACAAGCTGTT GGCGCCGTTC GCGGTTGCCC TGGCGCTGCT GTCGGCGTTC
CTGACCTTCG TGGTGTTGAC CGGCCTGACC CCGATCACGC CGACTCGGCA GGTGGTGGTC
ACCTTCCTGC TGATCAACGC CGCCACCGTG CTGCTGCTGG TGATGATCAT CGCCCGCGAG
TTGTGGCAGG TGGTGCAGGC GCGGCGGCGC GGACGCGCCG CGGCCAGACT CCACGTGCAG
ATCGTCAGCC TGTTCTCGGT GATCGCGGTG CTGCCGGCGG TGCTGGTGTC GATCGTCGCC
AATGTCACCA TCGACCGCGG GCTGGACCGG CTGTTCTCCG GGCCGACCCG GGCGGTGATC
CAGAACTCGC TGATCGTCGC CAACGCCTAT CTGCACGAAC ACGCCCAGCT GATTCGCGGC
GACATCATCG GCATGGCCAA CGACGTCAAT CATGCCCGGC CGCTGTTCGA CCAGGACCGC
CAGAGTTTCC GGCAGGTTCT CACCGCCGGC GCCGCCTCGC GCAATCTGCC CGGCGCGATG
TTGATCGACA AGGATCGCAA CATCCTGGAA TCGGCGCAGA CCGGCATCCG GCAGGACTTC
GACACCCCGG CGCCGGAATT CCTCAGCAAC GTCGACGACA CCGAGCCGCA GATCGCGGTG
TTCATCGAGG CCAACTACGT CGCCGCGGTG ATCCGGCTCA GCGCGTTCAG CGACACCTTC
CTTTATGTCG CGCGACTGCT CGATCCGCGG GTGGTGGCGC AGCTGCGCCA GACCCAGGCC
AGCGTCGCCG AATATGCCGA GATCGAAGCC AGCCGGCTCG GCTTCCAGGT GACCTTGGCG
CTGTTGTTCA CGGTGATCGC GCTCACCGTG CTGATGTCGT CGGTGCTGAT CGGGCTGAAT
TTCGCCAATT GGCTGGTGGG GCCGATCCGC CGGCTGATGG GCGCCGCCAA TCTGGTGTCG
ACCGGCGACC TCGACGTCCA GGTGCCGGTG ATCAAATCCG AAGGCGATCT GGCGCATCTC
GGCGAGACCT TCAACAAGAT GACGCAGGAA TTGCGCAGCC AGCGCGACGA GTTGGTCAGC
GCCAGCGAGG TGATCGACAG CCGCCGCCGC TTCATCGAGG CTGTGCTGTC GTCGGCCTCC
GCCGGCATCA TCGGCGTCGA TGCCTCGGGC TCGATCGGCA TCCTCAACCG CTCGGCCGAG
AAGCTGATAG GCCACTCCGA ATCCGAAACG CTCGGCCATC CGTTGACCGA GATCATTCCC
GAACTTGACG AGATGATGAA GACCGCGCGC GAGAGCGCGC AGCGCCTGCT GCAGGGCCAG
GTCACCATCA ATCGCGAAGG CCACGAGCGC AATCTGTCGG TGCGGATCAG CGCCGAGCAG
ACCAGTCACT CGCAGGACAG CTATATCATC ACGCTGGACG ACATCACCGA GCTGGTGTCG
GCGCAGCGCA CCTCGGCCTG GGCCGACGTC GCCCGCCGCA TCGCCCATGA GATCAAGAAC
CCGCTGACCC CGATCCAGCT GTCGGCCGAG CGCATCAAAC GCAAATTCGG CAAGCTGATC
GTCGAGGACA AGGGCATCTT CGAGCAATGC ACCGACACCA TCATCCGCCA GGTCGACGAC
ATCCGGCGCA TGGTCGACGA GTTCTCGCGC TTCGCGCGGA TGCCGAAGCC GGTGATTGAG
GGCGAGGACG TCGCCGATAC GGTGCGGCAG GCGGTGTTCC TGATGCGGGT CGGACATCCC
GACATCGACA TCGCCGCCGA AATCAAGGAC GAACCGCTGC GGGCGCGGTT CGATCGCCGG
CTGATCTCGC AGGCGTTGAC CAACATCATC AAGAACGCCA CCGAGGCGAT CGAAGCGGTG
CCGCCGGAAG AACTCGGCAA GGGCCGCATC GAAGTGGTGG CGGGGCGCGA GGGCGAGGAC
ATCGTGATCG ACGTCATCGA CAACGGCATC GGTCTGCCGA AGACCAGCCG CTCGCGGTTG
CTCGAGCCCT ACGTCACCAC CCGCGAGAAG GGCACCGGGC TCGGGCTGGC GATCGTCGGC
CGGGTGCTGG CGGATCACGG CGGCGCCATC GAACTCAACG ACGCATCGCT GCTGCGGCCC
GGGCAGCGCG GCGCCTGGAT GCGGCTGCGC TTCTCGATCT CCGGCCAGCC GCCGCAAGAA
CAGCCCGGCC CGCCGGCGAT CTCGATCCCG GGCGAACCGA AAATTCCAGT CACAAGCGGC
AACTAA
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| Protein sequence | MTSADTAAPS SEPHKAEPRR RRLHKLLAPF AVALALLSAF LTFVVLTGLT PITPTRQVVV
TFLLINAATV LLLVMIIARE LWQVVQARRR GRAAARLHVQ IVSLFSVIAV LPAVLVSIVA
NVTIDRGLDR LFSGPTRAVI QNSLIVANAY LHEHAQLIRG DIIGMANDVN HARPLFDQDR
QSFRQVLTAG AASRNLPGAM LIDKDRNILE SAQTGIRQDF DTPAPEFLSN VDDTEPQIAV
FIEANYVAAV IRLSAFSDTF LYVARLLDPR VVAQLRQTQA SVAEYAEIEA SRLGFQVTLA
LLFTVIALTV LMSSVLIGLN FANWLVGPIR RLMGAANLVS TGDLDVQVPV IKSEGDLAHL
GETFNKMTQE LRSQRDELVS ASEVIDSRRR FIEAVLSSAS AGIIGVDASG SIGILNRSAE
KLIGHSESET LGHPLTEIIP ELDEMMKTAR ESAQRLLQGQ VTINREGHER NLSVRISAEQ
TSHSQDSYII TLDDITELVS AQRTSAWADV ARRIAHEIKN PLTPIQLSAE RIKRKFGKLI
VEDKGIFEQC TDTIIRQVDD IRRMVDEFSR FARMPKPVIE GEDVADTVRQ AVFLMRVGHP
DIDIAAEIKD EPLRARFDRR LISQALTNII KNATEAIEAV PPEELGKGRI EVVAGREGED
IVIDVIDNGI GLPKTSRSRL LEPYVTTREK GTGLGLAIVG RVLADHGGAI ELNDASLLRP
GQRGAWMRLR FSISGQPPQE QPGPPAISIP GEPKIPVTSG N
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