Gene RPC_2509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2509 
Symbol 
ID3971091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2721281 
End bp2722723 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content69% 
IMG OID637925617 
Productsporulation related 
Protein accessionYP_532379 
Protein GI90424009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.218333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC GATACCAGGA CAGACCTTTT CCTGCGGACG ACGATTACCG CAACGGTCAG 
AACGCTGCCG CCAAGGCTGA TGGCGATCCG TTGGCCGAAT TGGCGCGACT GATCGGCCAG
ACCGATCCGT TCGCAAATTT CGGTCGCGCC AATCAACCGG CGCCGCCCGC TCCGAGCGAG
CCCGCGCGCG ATCCGTTGCG CGAGCAGTTT CGTCTGCCGT CGCAGTCTCC CGAAGTCGAA
GACGACGCGC CGATGGCGCC GTTGCCCTCG TGGATGCAGA ACCGCGCCGG GCGAGACACC
GGATTTCGCC AGGAGCCGTC GAGTTCACCG CACCCGGCGC AGCGCTACGC GACCCCGCAA
CCCGCAGCCG AGCCGGATTA CCGCGACCAG CAACTCTATG CCGCGGCTAC GGCGGCGCAG
CCGGCCGACC CGGAGCGCTA CGATGATGCG CTGTATGGCG CGATCGAGCC GACGCAGGGC
TACCTGCATC CGCAGCAGGA CGGCTATTCG GATCAGCCCT ACGATTACGC CGACAGCTAT
GCCGACGACG GCGGAGAGGT TCTGAAGCCG CGCCGAAGCG GCATGATGAC CGTTGTGGCG
GTGCTGACCC TGGCGGTGGT CGGGACTGGC GCAGCGTTCG GTTACCGCAC CTATGTCGGA
TCGCCGCGCA GCGGCGAGCC GCCGGTGATC AGGGCAGAGG CCGGCCCGAT CAAGGTGGTT
CCGCCATCGG GCGACGCCGC CAGCAAGCCG ATTCAAGATC GGCTGGCCGC GGGAAACGCC
GTCGAAACCC TGATTTCGCG GGAAGAACAG CCGCAGGACC CGAGCAAAGC GGCGCCGCGC
GTGGTGTTGC CGCCGCTGGC GCCGAACGGC AATCCGCCGT CCCCCGCCAG CGTGGCGCCG
GGCGGTAAAC AGCTCTCCGC CAGCAGCACC GGCGCGCTCG GCGAAGAACC GCGCAAGATC
AAGACCCTCA GCGTCCGGCC GGATCAGGCC GATCCGTCAG CGGCGCCGTA TGGACGGCCC
GCGGCCAAGC CGGCCGCGCC GGCGCCGGCT GCCGCGCGCA CCCCGCCGGC CCCGGTGGCC
AACGCCAATG CCTCGACCGC CAATGCGCCG CTGTCGCTGT CGCCGCAGAG CCAGCCCGCC
GAGCCGCGGG CGCGGGTCGC CTCGACCCAG CCCACCGCGC AGCCCGCCAC CAGCGGCGGC
TATGTGGTGC AGGTCTCGTC GCAGCGCAGC GAGGCCGACG CCCAGGCCTC GTTTCGCGCG
CTGCAGAGCA AGTTCGGATC GGTGCTCGGA TCGCATCGGC CGCTGATCAA GCGCGCCGAT
CTCGGCGAAA AGGGCGTGTA TTATCGCGCC ATGGTCGGGC CGTTCGGCTC GCCCGACGAG
GCCTCGCAGT TCTGCGGCAA CCTGAAAAGT GCCGGCGGAC AGTGCGTCGT CCAAAGAAAT
TAA
 
Protein sequence
MAERYQDRPF PADDDYRNGQ NAAAKADGDP LAELARLIGQ TDPFANFGRA NQPAPPAPSE 
PARDPLREQF RLPSQSPEVE DDAPMAPLPS WMQNRAGRDT GFRQEPSSSP HPAQRYATPQ
PAAEPDYRDQ QLYAAATAAQ PADPERYDDA LYGAIEPTQG YLHPQQDGYS DQPYDYADSY
ADDGGEVLKP RRSGMMTVVA VLTLAVVGTG AAFGYRTYVG SPRSGEPPVI RAEAGPIKVV
PPSGDAASKP IQDRLAAGNA VETLISREEQ PQDPSKAAPR VVLPPLAPNG NPPSPASVAP
GGKQLSASST GALGEEPRKI KTLSVRPDQA DPSAAPYGRP AAKPAAPAPA AARTPPAPVA
NANASTANAP LSLSPQSQPA EPRARVASTQ PTAQPATSGG YVVQVSSQRS EADAQASFRA
LQSKFGSVLG SHRPLIKRAD LGEKGVYYRA MVGPFGSPDE ASQFCGNLKS AGGQCVVQRN