| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2479 |
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| Symbol | |
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| ID | 3971236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2687880 |
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| End bp | 2688971 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925587 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_532349 |
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| Protein GI | 90423979 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.301075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.376583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGAG ACGTTGTGAC CACCTCGCAA GCGGCCAAGC TGCTCGGCAT TTCCGTGCGC
ACGGCGCAGC TGTTGGTGGA AAGCGGCGCG CTGACCTCGT GGAAAACCCC AGGCGGCCAC
CGGCGGGTGT ACCGCGCCGA CGTGATGGCG CTGATGAAAC AGCCCAACCA GCCACCGGCG
GTTTCCTCTG CCGTCGTCGT GCTCGCTGCG CCGGATCGGC TGCCGCTCTA TGAGGATATT
CTCTCAACCG TGAGGGAATG CTCCGCCGAG TTGCACAGTG AGGTCTATCA GGCGTCGTTC
GCGATCGGCG CGCGGCTTCC GGCGGCCGTG ATCGTCGATC TGAACGAGGA CGGCGGCGAG
CGGCTTGCCT TCGTGCGCAG CCTGGAGTCC GATCCGGCGA TCGGGCATGC GCGGGTCATC
GTGGTGGGCG GCGATGATGA TGCGTCGGAT GGCGCCGCCG GGCCAAAGCG AATCCCCTCA
CCGCAATTGG TGCCGGATGC GCTCCGCGCT GTGTTGGCGT GCGCGACGAA GTCCAGCGCG
ATCGACGGCC CCCTGCCGTT TCCGATCGCC GCCAATGAAG CTCAGCGGTT GATCGCGTTG
CAACGGTCAG GTCTGGTCGA CACCGCTGCG GAGAAATCCT TCGATCGGGT GACGTGGCTC
GCCAGCCATG TTTTGGGAAC GCCGATCTCG CTGATGACGC TACTCACGCC GAGCCGCCAA
TGGTTCAAGT CGCGTCAGGG CCTCGACATG GTGGAGACGC CGCGGAGCTG GGCGTTCTGC
AATCAGACGA TCCTGCAGCG CGACGTGTTC GCCGTGGAAA ATTTGGCGCT CGATCGACGT
TTCGCCGATA ACCCGGCGGT CGCCGGCGAT CCTCATTTTC GATTTTATGC CGGCGCGCCG
GTACTCGATC CCAACGGATT CGCGCTGGGA TCGGTGTGCG TGATCGACTA CGAGCCGCGC
CGGCTCGATC GAGACCAGAC CGAGTCGCTG CGTGCGCTGG CGGCGCTGGC CTCCGATCAG
GTTCGTCTGC GGGCCAATGA TCGCGAGCTT CGTTGGGCTC AGAACGAACT CAGCCGCGCC
CGCAAACATT GA
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| Protein sequence | MERDVVTTSQ AAKLLGISVR TAQLLVESGA LTSWKTPGGH RRVYRADVMA LMKQPNQPPA
VSSAVVVLAA PDRLPLYEDI LSTVRECSAE LHSEVYQASF AIGARLPAAV IVDLNEDGGE
RLAFVRSLES DPAIGHARVI VVGGDDDASD GAAGPKRIPS PQLVPDALRA VLACATKSSA
IDGPLPFPIA ANEAQRLIAL QRSGLVDTAA EKSFDRVTWL ASHVLGTPIS LMTLLTPSRQ
WFKSRQGLDM VETPRSWAFC NQTILQRDVF AVENLALDRR FADNPAVAGD PHFRFYAGAP
VLDPNGFALG SVCVIDYEPR RLDRDQTESL RALAALASDQ VRLRANDREL RWAQNELSRA
RKH
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