| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2458 |
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| Symbol | |
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| ID | 3971349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2664460 |
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| End bp | 2665086 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637925566 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_532328 |
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| Protein GI | 90423958 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.337506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.279583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGACA CGCTTGCCCC CGACGCCGCC GACGCGCTGT TGTTCGATCT CGGCCGGGTG
GTGATCGATT TCGATTTCGA CCGCACCGTC GCCGCCTGGG CCCGCGACGT CGGCTGCACG
CCGGCCGATC TGCGCGCCCG CTGGACGCCC GACGACGCCC ATCACCGCCA CGAACGCGGC
GAGATCGACG ACGCCGCGTT CTTCGCCATC CTGCGTGACC GGCTCGGCCT CGCGCTCACC
GACGCCCAGT TTCTCGCCGG TTGGAACGCC ACCTTCGTCG GTGCGATGCC GGGCATCGCG
CCACTGCTGG CGCGCGCCGC CGCGCGGCTG CCGCTCTATG CGCTCAGCAA CACCAACCCG
GCGCATGTCG CGCATTTCTC GCAAGCCTAT GCCGACCTGC TCGGACATTT CCGCCGCGTG
TTCGCGTCGT CGGCGATCGG AGCGCGCAAA CCCGATCCCG CCGCCTACGA CCACGTCATC
GCCGAGATCG GCGCGAAGGC TGAGCGCATC GTGTTCTTCG ACGACCTGAT CGAGAATGTC
GAAGCCGCCC GCGCCCGCGG CCTGATCGCC GTGCATGTTC GAAGCAGCGC CGACGTGGCC
CACGCATTGG ATGCGCTCGG CGTGTAG
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| Protein sequence | MLDTLAPDAA DALLFDLGRV VIDFDFDRTV AAWARDVGCT PADLRARWTP DDAHHRHERG
EIDDAAFFAI LRDRLGLALT DAQFLAGWNA TFVGAMPGIA PLLARAAARL PLYALSNTNP
AHVAHFSQAY ADLLGHFRRV FASSAIGARK PDPAAYDHVI AEIGAKAERI VFFDDLIENV
EAARARGLIA VHVRSSADVA HALDALGV
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