| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2388 |
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| Symbol | |
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| ID | 3971524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2590177 |
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| End bp | 2591676 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637925494 |
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| Product | hypothetical protein |
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| Protein accession | YP_532259 |
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| Protein GI | 90423889 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.400185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATTC TCAGCACGAC TGAAATGGAA CGCGCCGACC TGTTGACGAT CTCCAGCGGG
TCGTCCGGCT TTGCGTTGAT GCTGGCGGCC GGCCGGGCGG TGGCCAATGC GGCGAGCGAC
CTCGTGGAAG AGGGGCCGAT CCTGGTGGTG GCGGGCGCCG GCAACAACGG CGGCGATGGC
CTGATCGCCG CCACCGAATT GCTGGCGAAG GGCCGCGAGG TCTCGGTGAT CCTGCTCGGC
GAGCGCGACG CGCTGAAAGG CGACGCGGCG CTGGCGGCGC GGGAATGGAA GGGCCCGGTG
TTCCCGTTCC ACCCGCAGGC GATCAAAACA CCCGCCTTGA TCATCGACGC GCTGTTCGGC
GCAGGCCTCA ACCGGCCGGT GAAGGGCGAT GCGCAGGCGG TGATCGAGGC GATCAACGAC
AGCGGCGCGC CGGTGCTCAG CATCGACCTG CCGAGCGGCA TCAGCGGCAA TACCGGGGCG
ATCATGGGCG TGGCGATCCG CGCCCGCGAG ACCGTGACGT TTTTCCGCCG CAAGCCGGGA
CACCTGCTGC TGCCGGGCCG GCTCAATTGC GGCCGGGTCC GCGTCGTCGA CATCGGCATC
GACGACGAGG TGCTGCAGGA GATCCACCCG GCCACCTTCG AGAACTGTCC GGAGTGGTGG
CAGCGCGCGT TTCCGGTGCC GCGAATCGAC GGCCACAAAT ATGGCCGCGG TCACGCGGTG
ATCGTCTCCG GCGGGCTCGG AGCCTCCGGT GCGGCGCGGC TGGCCGGGCG AGGCGCGTTG
CGCGCCGGCG CCGGCCTGGT GACGTTGGCG TCGCCGCGCG ACGCGCTTGC GGTCAATGCC
GCGGCGCTGA CCGCGATCAT GCTGCGCACC ATCGACACCC CGGCCGAATT TGCGACGCTG
TTGACCGACC GCCGCTTCAA CGCCTGCGTG ATCGGTCCCG GCGCCGGGGT CGGGCACCGC
ACCCGCGAAC TGGTTCATGC CGCGCTCGGA GCCGGCTGCA GCAGCGTGCT CGACGCCGAC
GCGCTGACCA GCTTCGCCGA TGCCCCGGAC CGGCTGTTCG AGGCGATCAA ATCCGCGGAG
AATTCACAGG TTGTGCTGAC CCCGCACGAG GGCGAATTCC CACGGCTGTT CAGCGACATG
AGCAACAAAA ATCCACTTCG CTCGAAACTT GAACGGGTGC GGGTGGCAGC GGAGCGCTCC
GGCGCCGTGG TGCTGCTCAA GGGGCCCGAT ACCGTGGTGG CATCGCCGGA CGGCCGCGCC
ACCATCGCCG CCAACGCGCC GCCCTGGCTC GCCACCGCCG GCGCCGGCGA CGTGCTGTCC
GGGTTCATCG CCGGGCTGTT GGCGCAGCGG GTGCCGGCGT TCGAAGCGAC CTGCATCGCG
GTCTGGCTGC ATGGCGAAGC CGGCAGCGAG GCCGGCCCCG GGCTGATCGC CGAGGATCTG
CCCGAAGTGC TGCCGGCGGT GTTCCGCAGG CTTTATGACG AGTTCGGGAT CGAGTACTGA
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| Protein sequence | MEILSTTEME RADLLTISSG SSGFALMLAA GRAVANAASD LVEEGPILVV AGAGNNGGDG
LIAATELLAK GREVSVILLG ERDALKGDAA LAAREWKGPV FPFHPQAIKT PALIIDALFG
AGLNRPVKGD AQAVIEAIND SGAPVLSIDL PSGISGNTGA IMGVAIRARE TVTFFRRKPG
HLLLPGRLNC GRVRVVDIGI DDEVLQEIHP ATFENCPEWW QRAFPVPRID GHKYGRGHAV
IVSGGLGASG AARLAGRGAL RAGAGLVTLA SPRDALAVNA AALTAIMLRT IDTPAEFATL
LTDRRFNACV IGPGAGVGHR TRELVHAALG AGCSSVLDAD ALTSFADAPD RLFEAIKSAE
NSQVVLTPHE GEFPRLFSDM SNKNPLRSKL ERVRVAAERS GAVVLLKGPD TVVASPDGRA
TIAANAPPWL ATAGAGDVLS GFIAGLLAQR VPAFEATCIA VWLHGEAGSE AGPGLIAEDL
PEVLPAVFRR LYDEFGIEY
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