Gene RPC_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2371 
Symbol 
ID3971543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2571672 
End bp2572364 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID637925478 
ProductTetR family transcriptional regulator 
Protein accessionYP_532243 
Protein GI90423873 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.533189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGGAT TCGTTCCCTG GTCTTGCGCA GGAGAAGCCG CCTTGTCGAC CCTCGACACC 
CCCAAACGCG TCGCCGGCAA GCGGGTCCGC GAGCAGGAGC GGCGCCGCCA GGCGATCCTC
GACGCCGCCT TCGTGCAGTT CACCAGCGAA GGCTTTGCGG CGACCAGGCT CGACGCGGTG
GCGGACGCCG CCGGCGTCGC CAAGGGCACG ATCTATCTGT TCTTCAAGGA CAAGGAAGAT
CTGTTCGAGA AGACCGTGCT GGCGGCGATC GGCCCGACCT TGAGCAATCT CGACAGCGTG
GTGGCGCGCG CCGACCTGCC GTTCCCGCAA CTGCTGGGGC AGCTCTCCGA TCTGTTCCGG
CGCGAGATCC TGGAAACCAA GCGCCGCGAG ATCGTGCGCT TGGTGATCGC CGAGGGCGCG
CGGTTTCCCG GGATCGCCGA ATTCTATCAC CGCGAGGTGA TTTCTCGCGG CCTGTCGATC
ATCCGCAAGG CCGCGCAACG CGCGCAGGAC AACGGCGAAT TGCCGTCCGA CGCGCTGGTG
CGGTTTCCGC AATTGCTGTT CGCGCCGATG CTGATCAGCA TCATCTGGAG CTGCGTGTTC
ACCCAGCACG AGCCGCTCGA CGTCGAGGGC ATGCTGGCGG CGCATCGCGA TCTGTTGCTC
GGCGTGCCGC ATGACGGGAG CGCCAAGCCA TGA
 
Protein sequence
MIGFVPWSCA GEAALSTLDT PKRVAGKRVR EQERRRQAIL DAAFVQFTSE GFAATRLDAV 
ADAAGVAKGT IYLFFKDKED LFEKTVLAAI GPTLSNLDSV VARADLPFPQ LLGQLSDLFR
REILETKRRE IVRLVIAEGA RFPGIAEFYH REVISRGLSI IRKAAQRAQD NGELPSDALV
RFPQLLFAPM LISIIWSCVF TQHEPLDVEG MLAAHRDLLL GVPHDGSAKP