Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2369 |
Symbol | |
ID | 3971541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2568911 |
End bp | 2570638 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925476 |
Product | ABC transporter related |
Protein accession | YP_532241 |
Protein GI | 90423871 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.296305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCGC TGGTCTCCAC CGAGGGCCTG GCAAAATCCT TTGCGCCGAA CGCCGCCCCG GCGATCCAGG CGCTAACGAC GACAATCAAG GCCGGCCAGG TTACCGGGCT GGTCGGCCCG GACGGCGCCG GCAAGACCAC CTTGATGCGG CTGATCGCGG CGTTGCTGGA GCCGAGTGCA GGCCGCATCG ACGTGCAGGG CCGCGACACC CGCACCGAGG GCGCCGCGAT CCACGACGAG ATCGGCTACA TGCCGCAGCG CTTCGGGCTC TATGAAGACC TCTCGGTGAT GGAGAACCTC ACGCTGTACG CCGACCTGCG CGGCGTGGTC GGCGACGAGC GCACCGCGAC GTTCGAAAAG CTGCTGGCCT TCACCGATCT GGCGCGCTTC ACCGACCGGC TGGCCGGCGC ATTGAGCGGC GGCATGAAGC AGAAGCTGGG GCTCGCTTGC GCGATGCTGA AATCGCCAAA ACTGTTGCTG CTCGACGAGC CCAGCGTCGG CGTCGACCCG ATCTCGCGGC GCGACCTGTG GAAGATGGTC TACACCCTGA TCGACCAGGG CGTCGGCGTG GTGTGGAGCA CCGCCTATCT CGACGAGGCC GAGAACTGCG CCGAAGTGAT CGTGCTCAAT CAGGGCCGCG TGCTATTTCA AGGCGACCCC AAGGACATGA CCGCCAAGAT GGCCGGCCGG GTGTTCAAGC TGCATGGCGC CGGCTCCGAG CGTCGCGCGC TGCTGGCGCG CACGCTGACC TCCGACGACG TGATCGATGG CGTGATGCAG GGCGAAGCGA TCCGCCTGGT GATCGCCGAG GGCGCCGCCG CGCCGACGGC ACAAAGCATC GGCGCCGCCT CTGTGACCAT CGCGCCGACG CCGCCGCGTT TCGAGGACGC CTTCGTGGCG ATGCTCGGCG GCCAGCCGAA GCGCACGCTG GCGCAGGCCA CACGACAACG CAGCGACGAA GCCGGCCAGG CCCCGGTTCA GGCCAAGGCG CTGACCCGCA GGTTCGGCAA TTTCACCGCC GCCGACCACA TCTCGTTCGA GATCGCGCGC GGCGAGATCT TCGGCCTGCT CGGGCCGAAC GGCGCCGGCA AATCCACCAC CTTCAAGATG ATGTGCGGGC TGCTGCGCCC GACCGAAGGC TCGGCGCTGG TCGACGGCCT CGATCTCTAC AAGGCCCCCT CCGCCGCGCG CGCCCGGCTC GGCTACATGG CGCAGAAGTT TTCGCTGTAT GGCGATCTCA GCGTCGCGCA GAATCTGGAT TTCTTCGCCG GCGCCTATGG GCTGTCCGGC GCGCGCCGCC GCGAAGCGGT CGGCCGGGTG ATCGAAGCGT TCGATCTGAA GCCGTTCCTG AACGAGAACT CCGGCGGCTT GCCGCTCGGC TTCAAGCAGC GCCTCGCGCT GTCCTGCGCC ATCATGCACG AGCCGCCGGT GCTGTTTCTC GACGAGCCGA CGTCGGGCGT CGACCCGCTG ACCCGGCGCG AGTTCTGGAG CTTCATCAAC GGCATGGTCG GACGCGGCGT CACCATCATG GTGACCACAC ATTTCATGGA CGAAGCCGAA TATTGCGATC GCGTCGCCTT GATCTATCGC GGCAAATGCA TCGCGGTCGA CACCCCCGAG GCGTTGCAGC ACGCGGTGAA ATCCAAGGAG ATCCCGGAGC CGACGCTGGA AGACGCCTTC ATCGCGCTGG TCGAGCAGCA CGATCGCGCG CAGCAGGCCG CGGCATGA
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Protein sequence | MAALVSTEGL AKSFAPNAAP AIQALTTTIK AGQVTGLVGP DGAGKTTLMR LIAALLEPSA GRIDVQGRDT RTEGAAIHDE IGYMPQRFGL YEDLSVMENL TLYADLRGVV GDERTATFEK LLAFTDLARF TDRLAGALSG GMKQKLGLAC AMLKSPKLLL LDEPSVGVDP ISRRDLWKMV YTLIDQGVGV VWSTAYLDEA ENCAEVIVLN QGRVLFQGDP KDMTAKMAGR VFKLHGAGSE RRALLARTLT SDDVIDGVMQ GEAIRLVIAE GAAAPTAQSI GAASVTIAPT PPRFEDAFVA MLGGQPKRTL AQATRQRSDE AGQAPVQAKA LTRRFGNFTA ADHISFEIAR GEIFGLLGPN GAGKSTTFKM MCGLLRPTEG SALVDGLDLY KAPSAARARL GYMAQKFSLY GDLSVAQNLD FFAGAYGLSG ARRREAVGRV IEAFDLKPFL NENSGGLPLG FKQRLALSCA IMHEPPVLFL DEPTSGVDPL TRREFWSFIN GMVGRGVTIM VTTHFMDEAE YCDRVALIYR GKCIAVDTPE ALQHAVKSKE IPEPTLEDAF IALVEQHDRA QQAAA
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