Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2327 |
Symbol | |
ID | 3972168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2528711 |
End bp | 2529358 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637925435 |
Product | CDP-alcohol phosphatidyltransferase |
Protein accession | YP_532200 |
Protein GI | 90423830 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.987779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.461788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCG TGCCGGCGTT ATATTATGTA GACAGGATGC AGACCCCGGT CGCCAGAGTT CAGTCGCGTG TTGGCAGTGA GGCCGGGAGC CGGAATCGTC GCGTGAGCAT TCCCAATATC ATTACGCTCG GCCGCATTCT GCTGGTGCCG GTGATCGTCT GGGCGATCGC GTCCAACCAA ATGGAAATCG CCTTCGCGTT GTTCATCGTC GCCGGCGTCA GCGACGCGGT CGACGGTTTC CTCGCCAAGC GGTTCAATAT GGCGAGCGAA CTCGGCGCGC TGCTCGATCC GTTGGCCGAC AAGGCGCTGT TGGTGTCGAT CTATGTGGCG CTGGGGATCG AGAGTGCGAT CCCGCGCTGG CTGGTGATCC TGGTGGTGTC GCGCGACATC ATGATCGTCG GCGCGGTGAT CGTGTCGTGG GTGTTCGGCA AGCCGATACC GATGAAGCCG CTGATGGTCT CGAAGCTCAA CACCGTGGCG CAGGTCGGAT TCGCCGCCCT GATCCTGGCG GCGCTGGGAT TCGGGTTCTC GCCGCAGCCT TATGATCTTA TTCTAATGGG CACGGTGGCC GTCTTGACCT TGCTTTCGGT GTCCTTCTAT CTCGTCGAGT GGACCAAACA CATGGGCACG ATCGAGCGCA GCCACTAG
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Protein sequence | MARVPALYYV DRMQTPVARV QSRVGSEAGS RNRRVSIPNI ITLGRILLVP VIVWAIASNQ MEIAFALFIV AGVSDAVDGF LAKRFNMASE LGALLDPLAD KALLVSIYVA LGIESAIPRW LVILVVSRDI MIVGAVIVSW VFGKPIPMKP LMVSKLNTVA QVGFAALILA ALGFGFSPQP YDLILMGTVA VLTLLSVSFY LVEWTKHMGT IERSH
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