Gene RPC_2326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2326 
Symbol 
ID3973284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2527480 
End bp2528553 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content67% 
IMG OID637925434 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_532199 
Protein GI90423829 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.290709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.502362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC GCAAGAACGG CCTCACCTAT GCCGACGCCG GTGTCGATAT CGACGCCGGC 
AACCGTCTCG TCGATCTGAT CAAGCCGATG GTCCGGGCCA CCGCCCGGCC CGGCGCCGAT
GCCGAAATCG GCGGATTCGG CGGATTGTTC GATCTGAAGG CCGCCGGCTT CAAGGATCCG
GTGCTGGTCG CCGCCACCGA CGGCGTCGGC ACCAAGGTCA AGATCGCCAT CGAGGCCGGA
TTGCACGCCG GGATCGGCAT CGATCTCGTG GCAATGTCGG TCAACGATTT GGTGGTCCAG
GGCGCCGAGC CCTTGTTCTT TCTCGACTAC TTTGCCTGCG GCAAGCTCGA TCCGGTGGCC
ACCGCGGCGA TTGTCGCAGG GATCGCCGAG GGTTGCCGCG ACTCCGGCTG CGCGCTGATC
GGCGGCGAGA CCGCGGAGAT GCCCGGGCTC TACACGGACG GCGATTACGA TCTCGCCGGC
TTTGCGGTCG GCGCGGCGGA ACGCGGCACC CTGCTGCCCG GCAAGGATAT CGCCGCCGGC
GACGCGGTGA TCGGGCTCGC CTCCTCCGGC GTGCATTCCA ACGGCTTCTC GCTGGTGCGC
AAGATCGTCG AACGCTCAGG CCTCGGCTAC GACGCCAACG CGCCGTTCTC GCCGGTGATG
ACGCTCGGCG GCGCGTTGCT GGCGCCGACC AAGCTCTACG TAAAATCCTG CTTGCGCGCG
ATCCGCGAAA CCGGCGCGGT GAAGGGCCTC GCCCACATCA CCGGCGGCGG CTTCACCGAC
AACATCCCGC GCGTGCTGCC GCCGCATCTC GGCGTCGGCA TCGACCTGCC GCGACTGCCG
GTGCTGCCGG TGTTCAAATG GCTGGCCGAG CAAGGCGAGA TCGCCGAACT CGAACTGTTG
CGCACCTTCA ATTGCGGCAT CGGCATGATC GCGATCGTCA GGGCCGACGC GGTCGAACAA
GTCAGCGACA TCCTCACCGA GGCCGGCGAA ACGGTCTGCC TGCTTGGCGA AGTGATCGAA
GCCAAGGGCG AGCACCGCGT GGTCTATAGC GGCCATCTCG ATCTGGCGTG GTGA
 
Protein sequence
MTDRKNGLTY ADAGVDIDAG NRLVDLIKPM VRATARPGAD AEIGGFGGLF DLKAAGFKDP 
VLVAATDGVG TKVKIAIEAG LHAGIGIDLV AMSVNDLVVQ GAEPLFFLDY FACGKLDPVA
TAAIVAGIAE GCRDSGCALI GGETAEMPGL YTDGDYDLAG FAVGAAERGT LLPGKDIAAG
DAVIGLASSG VHSNGFSLVR KIVERSGLGY DANAPFSPVM TLGGALLAPT KLYVKSCLRA
IRETGAVKGL AHITGGGFTD NIPRVLPPHL GVGIDLPRLP VLPVFKWLAE QGEIAELELL
RTFNCGIGMI AIVRADAVEQ VSDILTEAGE TVCLLGEVIE AKGEHRVVYS GHLDLAW