Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2317 |
Symbol | |
ID | 3973275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2519558 |
End bp | 2521441 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637925425 |
Product | ABC transporter related |
Protein accession | YP_532190 |
Protein GI | 90423820 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.359814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTCAC TCAATGAAAT CTCGATCCGG CTTGCCGGAC GGCTGTTGAT CGATCACGGC ACCGCGCAGA TCGCGCCGGG CGCCCGGGTC GGCTTCATCG GCCGCAACGG CGCCGGCAAA TCCACCCTGT TCCACGCCAT TCGCGGCGAC CTGCCGACCG AAACCGGCAG CATTTCGCTG CCGCCGCGCT GGCGGATCGG CAGCCTCGCC CAGGAAGCCC CGAACGGCCC GGAGACGTTG CTCGAAGTTG TGCTGAAGGC CGATCTGGAA CGCGATGCGC TGCTGATCGA AGCCGAAACC GCGCACGATC CGCACCGCAT CGCCGAGATC CAGACCCGGC TGGTCGACAT CGACGCCCAT TCCGCCCCCG CCCGCGCCGC CGCCATCCTC TCGGGCCTCG GCTTCTCCAC CGCCGACCAA GCGCGCTCCT GTTCGGAATT CTCCGGCGGC TGGCGGATGC GGGTGGCGCT CGCCGCCACG CTGTTCTCGG CGCCCGATCT GTTGCTGCTC GACGAGCCGA CCAACTATCT CGATCTCGAA GGCACGCTTT GGCTGGAGGA CCATCTCGCC AACTATCCGC GCACCGTGAT CGTGATCAGC CATGACCGCG ATCTGCTCGA CACCTCGGTC AACGAGATCC TGCATCTGGA TCGCGGCAAG CTGGTGCATT ACCGCGGCAC GTATTCCGCC TATGAGGAAT TCCGCGCCAA CAAGGAAGCG CTCGACGCCA AGAACTTCAA GCGCCAGGAG GCGCAGCGCA AGCATCTGCA GTCGTTCGTC GACCGCTTCA AGGCCACTGC CTCCAAGGCT CGTCAGGCGC AGTCGCGCGT GAAAATGCTG GAGCGGATGA AGCCGGTGTC GGCGCTGGTG ACGCAGGACG TCAAGGAATT CCACTTCCCG GCGCCGGAAA AGATCCTGTC GCCGCCGATC ATCGCCGTCG ACAACGTCAC CGTCGGCTAC GACAAGAAGC ACCCGGTGCT GAAGAACGTC ACGCTGCGGA TCGATACCGA AGACCGCATC GCGCTGCTCG GTTCCAACGG CAACGGCAAG TCCACCTTGG TGAAGCTGTT GGCCAACCGC TTGGCGCCGT TCTCCGGCTC GGTGATCCGC GCCGACAAAT TGGCGATCGC TTACTTCGCG CAGCATCAGC TCGACGAACT CAACGAGGAC GGCTCGCCCT ACGACCACGT CCGCAAGCTG ATGCCGGACG CCACCGAAAC CAAGATCCGC GGCCGCACCG GCGCGCTCGG CTTCTCCGGC AAGGCCGGCG ACACCATCGT GAAGTCGCTC TCGGGCGGCG AGAAGGCGCG GCTATTGCTG GGGCTAGCCA CCTTCTTCGG TCCCAACATG ATCATCCTCG ACGAGCCGAC CAACCATCTC GACATCGACA GCCGCGCTGC GTTGGCAGAA GCGATCAACG ATTATCCCGG CGCGGTGATC ATGGTGTCGC ATGATCGCTA CCTGATCGAG GCCTGCGCCG ATCAGTTGTG GGTGGTTGCC GACCACAAGG TGACGCCGTA CGACGGCGAC CTCGACGATT ATCGCCGCTC GGTGCTGTCG AGCCGCGGCA TGCGCGCCAG CCCGCGCGAT CGCGGCGGCC AGGACGGCGG CAATGATCGC GGCAACGGCA AGGTCGCGCG TGCCAAGGGC GAGAAGAAAC CGTCGTTGAA GGCACAGATC GCCGCGGCCG AGGCCGAGAT GGAGCGCATC ACCGGCATCA TCGCCAAGCT CGACACCGCG CTGGCGCTGC CCGATCTGTT CAAGAAAGAT CCGAAACAGG CGGCGCAACT CAGCAAGGCC CGCGCCGGTG CCGAAGCCGC GTTGCAGAAG GCCGAAGAAA CCTGGCTGGC GGCGAGCGCG TCCTACGACC AGGCGCAGGG GTGA
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Protein sequence | MLSLNEISIR LAGRLLIDHG TAQIAPGARV GFIGRNGAGK STLFHAIRGD LPTETGSISL PPRWRIGSLA QEAPNGPETL LEVVLKADLE RDALLIEAET AHDPHRIAEI QTRLVDIDAH SAPARAAAIL SGLGFSTADQ ARSCSEFSGG WRMRVALAAT LFSAPDLLLL DEPTNYLDLE GTLWLEDHLA NYPRTVIVIS HDRDLLDTSV NEILHLDRGK LVHYRGTYSA YEEFRANKEA LDAKNFKRQE AQRKHLQSFV DRFKATASKA RQAQSRVKML ERMKPVSALV TQDVKEFHFP APEKILSPPI IAVDNVTVGY DKKHPVLKNV TLRIDTEDRI ALLGSNGNGK STLVKLLANR LAPFSGSVIR ADKLAIAYFA QHQLDELNED GSPYDHVRKL MPDATETKIR GRTGALGFSG KAGDTIVKSL SGGEKARLLL GLATFFGPNM IILDEPTNHL DIDSRAALAE AINDYPGAVI MVSHDRYLIE ACADQLWVVA DHKVTPYDGD LDDYRRSVLS SRGMRASPRD RGGQDGGNDR GNGKVARAKG EKKPSLKAQI AAAEAEMERI TGIIAKLDTA LALPDLFKKD PKQAAQLSKA RAGAEAALQK AEETWLAASA SYDQAQG
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