Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2300 |
Symbol | |
ID | 3973741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2500029 |
End bp | 2500766 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637925408 |
Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
Protein accession | YP_532173 |
Protein GI | 90423803 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0918045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGATT TATCAGGCAG GACCGCGTTG GTGACCGGCG CGACCGGAGG CATCGGCGGT GCGATCGCGC AAGCGCTGCA CGCTCAGGGC GCCACGGTGG CGATCTCCGG GACGCGACGC GAGGCGCTGG AGGCACTCGC CGCCAAGCTC GGCGAGCGGG TTCATGTGCT GCCCTGCAAT CTGTCCGACA CAGCCGAGGT CGAGGCGCTG GTGCCGGCCG CCGAGAAGGC GATGGGGCAG CTCGACATCC TGGTCAGCAA CGCCGGTATC ACCCGCGACA ATCTGTTCGT GCAGCTGCGC GACGAGGACT GGGACGAGGT GATCAAAGTC AATCTGACCG CGACGTTTCG GCTGGCGCGC GCCGCCACCA AATTGATGAT GCGCAAGCGG TTCGGCCGCA TCATCGCGAT CACTTCGGTG GTCGGCGTCA CCGGAAATGC CGGGCAGGGC AATTACGCCG CGTCGAAAGC CGGCCTGATC GGCATGATCA AGACGCTCGG CGCGGAATAT GCCAAGCGCA ACGTCACCGC CAACTGCATC GCACCCGGAT TCATCGCCAC GTCGATGACC GAGGTGCTCA ACGACAAGCA GCGCGAAGCG ATTCTCACCA AGGTGCCGGC GGGGCGGCTC GGCACCCCGG AAGATATCGC CGCGGCGGCG GTGTATTTGG CCTCCAACGA AGCCGCCTAC GTCACCGGCC AGACAATTCA CGTCAACGGC GGGATGGCGA TGATCTAA
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Protein sequence | MFDLSGRTAL VTGATGGIGG AIAQALHAQG ATVAISGTRR EALEALAAKL GERVHVLPCN LSDTAEVEAL VPAAEKAMGQ LDILVSNAGI TRDNLFVQLR DEDWDEVIKV NLTATFRLAR AATKLMMRKR FGRIIAITSV VGVTGNAGQG NYAASKAGLI GMIKTLGAEY AKRNVTANCI APGFIATSMT EVLNDKQREA ILTKVPAGRL GTPEDIAAAA VYLASNEAAY VTGQTIHVNG GMAMI
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