Gene RPC_2237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2237 
Symbol 
ID3973254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2440692 
End bp2441141 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content67% 
IMG OID637925345 
Producthypothetical protein 
Protein accessionYP_532110 
Protein GI90423740 
COG category[S] Function unknown 
COG ID[COG5349] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.483595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0351044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG ACGACAGCGC AGCGCGGCCC GCCCGCAGCT GGAGCGCGGA GGTCATTGCG 
CCGGAGAAGC GCAACGCCGT CACCGCGATC AAGCGCGGCT TGTTCGGCCG CTGCCCGCGC
TGCGGCGAGG GCAAGCTGTT CCGCGCGTTC CTCAAGGTCG ACGATCACTG CGCCAAGTGC
CAGCTCGACT TCACCCCGCA TCGCGCCGAC GACCTGCCGG CCTATCTGGT GATCGTCATC
GTCGGTCATC TGGTGGTGCC GATCGTGCTG TGGATCGAGA CCAATTATTC GCCGGCGGTG
CCGCTGCAGC TGGCGATCTA TCTGCCGATC ACGCTGCTGC TGTCGCTGGG ATTGCTGCAG
CCGGTGAAGG GCGCCGTGGT CGGGCTGCAA TGGGCGTTCC GGATGCACGG CTTCGACGAC
AATCCCCCTG GCGATATCCC CGCGGTCTAG
 
Protein sequence
MSVDDSAARP ARSWSAEVIA PEKRNAVTAI KRGLFGRCPR CGEGKLFRAF LKVDDHCAKC 
QLDFTPHRAD DLPAYLVIVI VGHLVVPIVL WIETNYSPAV PLQLAIYLPI TLLLSLGLLQ
PVKGAVVGLQ WAFRMHGFDD NPPGDIPAV