| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2192 |
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| Symbol | murD |
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| ID | 3972751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2389728 |
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| End bp | 2391128 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637925300 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_532065 |
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| Protein GI | 90423695 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCCCA TTACATCCTT CGCCGGCAAG ACGGTTGCCG TATTCGGTCT CGGCGGCTCC
GGCTTGGCGA GCTGTCAGGC CCTGAAAGCC GGCGGCGCCG ACGTCGTCGC CAGTGACGAC
AACATCGACC GGCTGGTCGA GGCGGCGCAG GCCGGCTTCA TCACCGCCGA TCTGCACAGC
GTCGCCTGGA GCAATATCGC AGCCCTGGTG CTCACCCCCG GCGTGCCGCT GACCCATCCG
GCGCCGCATT GGGCCGTGCT GGCGGCGCAG GCCGCGGGCG TCGAAGTGAT CGGCGATATC
GAACTGTTCT GCCGCGAGCG GAGATTGCTG GCGCCCGATG CGCCGTTCGT CGCCATCACC
GGCACCAACG GCAAATCCAC CACCACGGCG CTGATCGCGC ATCTGTTGCG GCAGGCCGGT
TTCGACACCC AGATGGGCGG CAATATCGGC ACCGCGATCC TGTCGCTCGA GCCGCCCGCG
GCGGGCCGGG TCCACGTCGT CGAGATGTCA TCCTACCAGA TCGATCTGAC GCCGTCGCTC
GATCCCAGCG TCGGCATTCT GCTCAACGTC ACCGAGGATC ATCTCGACCG CCACGGTTCG
ATCGAGCACT ACGCCGCGGT CAAGCAGCGG CTGGTCGCCG GCGTGCCGGA CGGCGGCACC
GCGATCGTCG GCGTCGACGA CGATTTCAGC GCCACCGCCG CCGAGCGCGT CGCCTTGGAC
GGCAAGACCG TGCTGCGGCT GTCGGTGAAG CGGCCGCTGG CCAATGGCAT CGTCGTCGAA
AACAACGCGA TCTATCGCGT CACCGACGGC GAGCGCGAGG CGATCGCGCG GATCGATGGC
ATCGGCTCGC TGCGCGGCCT GCACAACGCC CAGAACGCCG CCGCGGCCGC CGCGGCGGTG
CTGGCGCTCG GCGTCGATCG CGAGGCGCTG CAGCGCGGGC TGCGCAGCTT CCCCGGCCTG
GCGCATCGCA TGGAGCAGGT CGGCCGCCAG GGCGAAACCC TGTTCGTCAA CGACTCCAAG
GCCACCAATG CCGACGCCGC CGCCAAGGCG CTGTCGTCGT TCGAGGAGAT CTTCTGGATC
GCCGGCGGCA AGCCGAAGAC CGGCGGCATC GACAGCCTCG CTGGATTCTT TCCGAAGATC
CGCAAGGCCT ATCTGATCGG CGAAGCCGCG CAGGAATTTG CCGCCACGCT GGACGGCAAG
GTCGACTACG AGATCTGCGA GACGCTGGAA GTCGCGGTAC CGCACGCCGC GCGCGACGCC
GCAGCCTCCG AGCTGGTCGA CCCGGTGGTG CTGTTGTCGC CGGCCTGCGC CTCGTTCGAC
CAGTTCCGCA ATTTCGAAAT CCGCGGCAAC CGGTTCCGCG AACTGGTCAC CGCGCTGCCG
CACGTCGAGC CGGTGGTGTG A
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| Protein sequence | MIPITSFAGK TVAVFGLGGS GLASCQALKA GGADVVASDD NIDRLVEAAQ AGFITADLHS
VAWSNIAALV LTPGVPLTHP APHWAVLAAQ AAGVEVIGDI ELFCRERRLL APDAPFVAIT
GTNGKSTTTA LIAHLLRQAG FDTQMGGNIG TAILSLEPPA AGRVHVVEMS SYQIDLTPSL
DPSVGILLNV TEDHLDRHGS IEHYAAVKQR LVAGVPDGGT AIVGVDDDFS ATAAERVALD
GKTVLRLSVK RPLANGIVVE NNAIYRVTDG EREAIARIDG IGSLRGLHNA QNAAAAAAAV
LALGVDREAL QRGLRSFPGL AHRMEQVGRQ GETLFVNDSK ATNADAAAKA LSSFEEIFWI
AGGKPKTGGI DSLAGFFPKI RKAYLIGEAA QEFAATLDGK VDYEICETLE VAVPHAARDA
AASELVDPVV LLSPACASFD QFRNFEIRGN RFRELVTALP HVEPVV
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