| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2190 |
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| Symbol | |
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| ID | 3969173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2387037 |
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| End bp | 2388476 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637925298 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase |
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| Protein accession | YP_532063 |
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| Protein GI | 90423693 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAT TGCCCCTATG GACCGCTTCG GCGATGGCGG AGGCGATGCG CGCGACGCCG
AGCGGCGCGC TGCCCGACGC GATCTTCGGC ATCTCGATCG ACAGCCGCAC GCTGATCCCG
GGCGACGCTT ACTTCGCGAT TCGCGGCGAG GTTCATGACG GTCATGCGTT CGTCGCCGCG
GCCTTGAACG CCGGCGCCGG CCTCGCGGTG GTGGAGCGCG CGCAGCGCGA CAAATTCCCC
GCCGACGCGC CGCTGCTGCT GGTCGACGAC GTGCTCGCCG CCCTGGTCGA TCTTTCGCGC
GCGTCGCGGG CGCGGCTCGG CGCCAAGGTG ATCGCGATCA CCGGCTCGGT CGGCAAGACC
TCGACCAAGG AGGCGCTGCG GGCGGTGTTC GGCGCGCAGG GCGAGACCCA CGCCTCGGTA
GCGTCGTTCA ACAATCACTG GGGCGTGCCG CTGTCCTTGG CGCGCTGCCC GGCGTCGGCG
AAATTCGCGG TGTTCGAAAT CGGCATGAAT CATCCGGGCG AGATCCAACC CTTGGTGGCG
CTGGTGCGCC CCCATGTGGC GATCATCACC ACGGTGGAGC CGGTGCATCT GGAATTCTTC
GACAGCGTCG AGGCGATCGC CGACGCCAAG GCGGAGATCT TCACCGGGCT CGAGCCGAAC
GGCGCCGTGG TGCTGAACCG CGACAATCCG CAATTCGCGC GGCTGCGCAA ACGCGCCAAG
GCGCACGGCA TCAGCCGCAT CGTCTCGTTC GGCGCCGACG AGAAGGCCGA CGCGCGATTG
TTAGACATCG CGCTGCAGCC CGAGTGCTCG GCGGTGCGCG CGGCGGTGTT CGGCGAGGAC
GTCACCTACA AGCTCGGCAT TCCCGGCCGC CACATGGCGA TCAATTCGCT GGCGGTGCTG
GCGGCTGCCG AACTGGTCGG CGCCGACCTG GCGCTGGCGG CGTTGACGCT GTCGCAGGTT
CAGCCCGCCG CCGGTCGCGG CGTCCGCCAC ACGCTGCTGG TCGCCCATGG CGAGGCCACG
CTGATCGACG AGAGCTACAA CGCCAATCCG GCCTCGATGG CGGCGGCGAT CAACGTGCTC
GGCCAAGCGG CGGTCGGGCC GCAGGGCCGC CGCATCGCGG TGCTCGGCGA CATGCTCGAA
CTCGGGCCGC GCGGCCCGCA ACTGCATCGC GGGCTGGTCG AAGCCATCAA GGCCAACGCC
ATCGACACGG TATTCTGCTG CGGGCCGCTG ATGCGGCAGT TGTGGGACGC CCTTTCCACC
GGAAAGCGAG GCGGCTATGC AGAGGATGCG GCCGCTCTCG AATCGCAGGT CATCGCCGCG
ATCCGCGGCG GCGACGTCAT CATGGTGAAG GGCTCGCTCG GCTCGCGCAT GAAAACCATC
GTCACCGCGC TGGAGCGGCG CTATCCCGAC AATGCCGCGC TCAGCGACGC TGCGGTGTAA
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| Protein sequence | MSKLPLWTAS AMAEAMRATP SGALPDAIFG ISIDSRTLIP GDAYFAIRGE VHDGHAFVAA
ALNAGAGLAV VERAQRDKFP ADAPLLLVDD VLAALVDLSR ASRARLGAKV IAITGSVGKT
STKEALRAVF GAQGETHASV ASFNNHWGVP LSLARCPASA KFAVFEIGMN HPGEIQPLVA
LVRPHVAIIT TVEPVHLEFF DSVEAIADAK AEIFTGLEPN GAVVLNRDNP QFARLRKRAK
AHGISRIVSF GADEKADARL LDIALQPECS AVRAAVFGED VTYKLGIPGR HMAINSLAVL
AAAELVGADL ALAALTLSQV QPAAGRGVRH TLLVAHGEAT LIDESYNANP ASMAAAINVL
GQAAVGPQGR RIAVLGDMLE LGPRGPQLHR GLVEAIKANA IDTVFCCGPL MRQLWDALST
GKRGGYAEDA AALESQVIAA IRGGDVIMVK GSLGSRMKTI VTALERRYPD NAALSDAAV
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