| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2149 |
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| Symbol | |
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| ID | 3972436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2343053 |
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| End bp | 2345080 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925257 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_532022 |
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| Protein GI | 90423652 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0391093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA ATCGCATCGC CTACAAGCTC GGATTCGCCG GTCTGGTCGG TATCGCGCTG
TCGTTGACGA TGTCCGGCAA TCAGATGATC TCCGAAACCG CGGTCAATCT CGGCAACGAC
CGCGCCGATG CCCAACAGAG CATCGCCCGC CACGCACTGG AAGCCGACGT CGGGCTGCGC
CGGATGCAGC TTTCGGTGCG CGATATCCGG CTGGCGAAAA CTGCGGCGGA GGCCGAAAAG
GGCATCGCCA ACCTGCGCGA GGCCAATGCG CTCAGCGGCC GCGAGCTCGA CGCCGCAATC
AGCCAGACCG CGGCCTCCGA GAACAAAGGT CGGCTCGAAA CCGTCAAGAC GGTCGCGGCG
GAGTACTACC GGCTCGCCGA AGAGATCGCC AAGACCCAGC TGAAGTCGCT GGAAGTCGTC
GAGATGCGCA CGGTGATCAT CGGCGAATGG CGCCGCGCCA TGGAATCGGC GCAGTCGCAG
CTGGGAACCC TTGATGCCAC CCGCCGCTCC GACATCGAGA AGGTGCTGTA CGCCACCGAC
GCCACCTTCA ACATGCTGGA AGCGGCGACC TGGCGGTTCG GCGCCACCGA CGAGCCCGAG
CAGAAAGAGA TCATCGAAAA GCTGCCCGGC GATCTGAACG CCCAGCTGAT GCGGCTGCGC
CGGCTGAACA GCGACCCGGA ATTCATCGGC GACGTCGACT TCATGAATTC GATCCTGACC
GGCTATTACG ATGCCTCGGC CGAGGGCGTC GCCGCCGAAG TGGCGCGCAA GAACCTGGTC
GACGTCAAGG CCATGCCGCT CGGCAACCGC GCGCTGGACC TGATGCGCAC CGCGGTCGAC
GCCAGCGAGA CGCTGGCCGA CGAAGCCAAG AGCCGCGCCA AGGCCGACCT CTCCTCCGCC
AACCAGGTCA ATTTCGGACT CGGCATCTTG GTGATGCTGT CGTCGGTGGT GTCGGTGGTG
TTCGGCTTCG CCAGCGTGTC GCGGCCGCTG ATGAAGCTCA ACGGCGCGCT CGGCCAAATG
GCGAGCGGCG AGCTCAACGT GGAAATTCCC GGCGCCCAAC GCGGCGACGA GGTCGGCGAC
ATCGCCAAGA CCGTGGTGGT GATCCGCGAG AACGCCGCGC ATCGCGCGCA GCAGGAGGCC
GAAGCAATGG CCGACCAGGA GCACGCCGCA ACCGAACGGC GCAAGCAGGA CATGCACCGG
CTCGCCGACG AATTCGAAGG CGCGGTCGGC AAGATCGTGC AGACGGTGTC CTCGGCTTCC
GCCGAACTGG AAGCCAATGC CGGCACCCTC ACCGCCACCG CCGAACAGAC CGAACGGCTG
ACCACGGTGG TGGCCGCCGC CTCCGAGCAG GCTTCGACCA ACGTGCAGAC GGTGGCTTCG
GCGACCGAAG AGATGGCCTC CTCGATCAAC GAGATCAGCC GCCAAGTGCA GGACTCCGCA
CGGATCGCCG GCTCCGCGGT GCAGCAGGCG CAGAACACCA ACCAACGGAT CAATCAGCTG
GCGCAGGCGG CGAGCCGGAT CGGCGACGTC GTCGAACTGA TCAACACCAT CGCCGGGCAA
ACCAACCTGT TGGCGCTGAA TGCGACGATC GAGGCCGCCC GCGCCGGCGA GGCCGGCCGC
GGCTTCGCGG TGGTTGCCTC CGAGGTCAAG GCGTTGGCCG AGCAGACCGC CAAGGCCACC
GGCGAAATCA GCCAGCAGAT CACCGGCATG CAATCGGCCA CCAAGGAATC GGTGGCGGCG
ATCCACGAGA TCGGCACGAC GATTTCGCAG ATGTCGGAAA TTTCCTCGGC GATCGCCTCC
GCGGTGGAAC AGCAGGGCGC GGCGACCCAG GAAATCTCCC GCAACGTGCA GCAGGCGGCG
CTTGGGACCA CCGAGGTGTC CTCCAACATC GCCGACGTGC AGCGCGGCGC CAGCGAAACC
GGCTCCGCCT CGTCGCAGGT GCTGGTCGCC GCGCAATCAC TGTCGCGCGA CAGCGACGAT
CTGAAGCGCG AGGTCTCGCG GTTCTTGGAT TCCGTCCGCG CGGCGTGA
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| Protein sequence | MKLNRIAYKL GFAGLVGIAL SLTMSGNQMI SETAVNLGND RADAQQSIAR HALEADVGLR
RMQLSVRDIR LAKTAAEAEK GIANLREANA LSGRELDAAI SQTAASENKG RLETVKTVAA
EYYRLAEEIA KTQLKSLEVV EMRTVIIGEW RRAMESAQSQ LGTLDATRRS DIEKVLYATD
ATFNMLEAAT WRFGATDEPE QKEIIEKLPG DLNAQLMRLR RLNSDPEFIG DVDFMNSILT
GYYDASAEGV AAEVARKNLV DVKAMPLGNR ALDLMRTAVD ASETLADEAK SRAKADLSSA
NQVNFGLGIL VMLSSVVSVV FGFASVSRPL MKLNGALGQM ASGELNVEIP GAQRGDEVGD
IAKTVVVIRE NAAHRAQQEA EAMADQEHAA TERRKQDMHR LADEFEGAVG KIVQTVSSAS
AELEANAGTL TATAEQTERL TTVVAAASEQ ASTNVQTVAS ATEEMASSIN EISRQVQDSA
RIAGSAVQQA QNTNQRINQL AQAASRIGDV VELINTIAGQ TNLLALNATI EAARAGEAGR
GFAVVASEVK ALAEQTAKAT GEISQQITGM QSATKESVAA IHEIGTTISQ MSEISSAIAS
AVEQQGAATQ EISRNVQQAA LGTTEVSSNI ADVQRGASET GSASSQVLVA AQSLSRDSDD
LKREVSRFLD SVRAA
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