| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2136 |
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| Symbol | |
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| ID | 3972423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2333350 |
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| End bp | 2334120 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925244 |
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| Product | trans-aconitate 2-methyltransferase |
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| Protein accession | YP_532009 |
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| Protein GI | 90423639 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4106] Trans-aconitate methyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000208135 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00294275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCGACT GGGACGCCGA GCAGTATCTG AAGTTCGAGG ACGAGCGCAC CCGCCCGGCG
CGCGACCTGC TGGCGCAAAT CCCGCTCGAC GATCCGCGCA GGGTGGCGGA CATCGGCTGC
GGTCCGGGCA ATTCCACCGA GCTGCTGGTG AGGCGCTGGC CGCAGGCCAG GGTCACCGGG
GTGGACACCT CCGCCGACAT GCTGCGGCAG GCCCGCGAGC GGCTGCCCGG CCACAATTTC
ATCGAGGCCA ATATCGCGCA TTGGGCGCCG CCGGTCGGCA CCGACGTGGT GTTCGCCAAC
GCCGTGTTCC AATGGGTGCC GAACCATCTC AAGCACATGC AGCGGCTGGT GGGCGCGCTG
GAGCCGGGCG GCGTGCTGGC GGTGCAGATG CCGGACAATC TCGACGAGCC GTCGCACATC
ATGATGCGCG AGGTGGCGTT CCAGGAGCCG TGGCGGCATC AGCTCGCCGA GGCGGCGCAG
CTGCGCGACA ACTTGCCGAA GCCGGGGGCC TATTACGACG CGCTGCGGCC GTTGTGCAGC
CGGCTGGAGA TCTGGCACAC CGTGTATAAT CACGTGCTCG ACGATGCGAT GGCGATCGTC
GAATGGGTCA AGGGCACCGG GCTGCGGCCG TTCATCGATC CTTTGGAACT GCCGGAACGC
AAGGCCTATC TCGCGGCCTA CACCGCGCGG ATCGCCGCCG CTTATCCGCC GCAGGCCGAC
GGCAAGGTGC TGCTGCGGTT TCCGCGGCTG TTCGTCGTCG CGATCAAGTA G
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| Protein sequence | MADWDAEQYL KFEDERTRPA RDLLAQIPLD DPRRVADIGC GPGNSTELLV RRWPQARVTG
VDTSADMLRQ ARERLPGHNF IEANIAHWAP PVGTDVVFAN AVFQWVPNHL KHMQRLVGAL
EPGGVLAVQM PDNLDEPSHI MMREVAFQEP WRHQLAEAAQ LRDNLPKPGA YYDALRPLCS
RLEIWHTVYN HVLDDAMAIV EWVKGTGLRP FIDPLELPER KAYLAAYTAR IAAAYPPQAD
GKVLLRFPRL FVVAIK
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