| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2080 |
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| Symbol | |
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| ID | 3971845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2276967 |
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| End bp | 2278355 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925188 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_531953 |
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| Protein GI | 90423583 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.273143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGC GGTGGACACT CGACAGTTGG CGCAGCAAGC CGGTGCAGCA AATGCCGGAT
TATCCGGATG CCAAGGCGCT TGGCGAGGTC GAGGCGCAGC TGGCCACGTT TCCGCCGCTG
GTTTTTGCAG GTGAGGCGCG CAATCTGAAG CGGGCACTGG CGCGGGTTTG CGCCGGCGAA
GCCTTCCTGT TGCAGGGCGG CGACTGCGCC GAGAGCTTCG CCGAGCACGG CGCCAACAAT
ATCCGGGATT TCTTCCGCGT GCTGCTGCAG ATGTCGGTGG TCTTGACCTA TGCCGGCGCG
CTGCCGGTGG TGAAGGTCGG CCGCATCGCC GGGCAATTCG CCAAGCCGCG GTCCTCGCCG
ATGGAAAAGC GCGGCGACGT CGAATTGCCG AGCTATCGCG GCGACATCGT CAACGACATC
GGCTTCACTG CGGCGTCGCG GGTGCCCGAT CCGCAGCGCC AGCTGATGGC CTATCGGCAG
TCGGCGGCGA CGCTGAACCT GCTGCGGGCG TTTGCCACTG GCGGCTTCGC CAATCTCGGC
AGCGTGCACC AGTGGATGCT TGGTTTCCTG AAGGACTCCC ACCAGTCGCG GCGTTACAAA
GAGTTGGCCG ACCGGATCTC CGACGCGCTG AACTTCATGC GCGCCTGCGG CCTCAACCTG
GAAAGCCATC CGGAGTTGCG CGCCACCGAG ATCTACACCA GCCATGAGGC GCTGCTGCTC
GGCTACGAGC AGGCCTTCAC CCGGGTGGAT TCCACCACCG GCGATTGGTA CGCCACCTCC
GGCCACATGT TGTGGATCGG CGACCGCACC CGCCAGCTCG ATCACGCCCA TATCGAATAT
TTCCGCGGCA TCAAGAATCC GATCGGGTTG AAGTGCGGCC CGTCGCTCAA GACCGATGAA
TTGCTGAAGC TGATCGACGT GCTCAATCCG GACAACGAGC CGGGTCGCCT CACGCTGATC
GGCCGGTTCG GCGCCGACAA GATCGGCGAC AGCCTGCCGG GGATGATCCG CGCCGTGCAG
CGCGAGGGCC GCGCCGTGGT GTGGTCGTGC GATCCGATGC ACGGCAACAC CATCACCTCG
ACCTCGGGCT ACAAGACCCG GCCGTTCGAC CGCATCCTGT CGGAGGTGAA ATCGTTCTTC
ACCATCCACG CCGCGGAAGG CACCCACGCC GGCGGCGTGC ACCTCGAGAT GACCGGCCAG
GACGTCACCG AATGCATCGG CGGGGCGCGG GCGATCACCG ACGAGGACCT CAACAACCGC
TATCACACCG CCTGCGATCC GCGGCTCAAT GCCGAGCAGT CGATCGACAT GGCGTTCCTG
ATCGCGGAAC TGTTGAAGCA GGATCGGGTC GGCAAGGCCA GCCCGTTGCC GGTCGCCGCT
GGACTGTGA
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| Protein sequence | MSERWTLDSW RSKPVQQMPD YPDAKALGEV EAQLATFPPL VFAGEARNLK RALARVCAGE
AFLLQGGDCA ESFAEHGANN IRDFFRVLLQ MSVVLTYAGA LPVVKVGRIA GQFAKPRSSP
MEKRGDVELP SYRGDIVNDI GFTAASRVPD PQRQLMAYRQ SAATLNLLRA FATGGFANLG
SVHQWMLGFL KDSHQSRRYK ELADRISDAL NFMRACGLNL ESHPELRATE IYTSHEALLL
GYEQAFTRVD STTGDWYATS GHMLWIGDRT RQLDHAHIEY FRGIKNPIGL KCGPSLKTDE
LLKLIDVLNP DNEPGRLTLI GRFGADKIGD SLPGMIRAVQ REGRAVVWSC DPMHGNTITS
TSGYKTRPFD RILSEVKSFF TIHAAEGTHA GGVHLEMTGQ DVTECIGGAR AITDEDLNNR
YHTACDPRLN AEQSIDMAFL IAELLKQDRV GKASPLPVAA GL
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