Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2068 |
Symbol | |
ID | 3974026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2264188 |
End bp | 2265375 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637925176 |
Product | major facilitator transporter |
Protein accession | YP_531941 |
Protein GI | 90423571 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.731019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.214462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACA GGCCGCTTGT CGTTATTTTT GCCACCATCT GCCTGGACGC CGTCGGCATC GGCCTCGTCT TCCCTGTTCT GCCGCGGCTT CTTGAGGATG TCACGCACAG CCCGAACATC GCGCCCTATA TCGGGATCAT GACCGCGCTC TATGCGGTGA TGCAGTTTGT CTTCGCCCCC GTGCTCGGTG CTTTGAGCGA CAACCTCGGC CGGCGTCCCG TGCTGCTGAT TTCGCTCGCG GGAGCGGCCA TCAACTACGT CATCATGGCG TTCGCACCGC AGCTTTGGAT GCTGATGCTC GGCCGCGCAG TTGCCGGCCT GACCAGCGCC AATGTCTCCG TGGCAACGGC CTACATCACC GACATTTCAT CCGAGGACCA GCGCGCCCGC AGATTCGGCC TGTCCAACGC CATGTTCGGC ATCGGCTTTA TCATCGGGCC GGTTCTCGGC GGCCTGCTCG GCGACACCTG GCTGCGGCTG CCTTTCATCG CCGCCGCCGC GCTGAACGCC GGCAATCTCC TGCTGGCGTT GTTCGTGCTG CCGGAATCCC GCACGGCGGC CCGTGAGAAG ATCGATCTGG TCGCGCTCAA CCCGCTTCGG CCGCTGCGTT GGGTGTTCGC CATCAAGGGG CTTTTGCCCG TCGTGTTTGT GTACTTCATC TTGAGCGCAA CCGGGGAGGC CTACGGCGTC TGCTGGGCGT TGTGGGGTTT CGACACGTTT CAATGGAGCG GCCTGTGGAT CGGGCTTTCG CTCGGCGCTT TCGGTATCTG CCAAACGCTG GTGCAGGCCT TGCTGCCCGG CCCCGCGACC AAACTGCTTG GCGAGCGCAT GGCCGTTGTG GTGGGCATCG CCTGCGCCTG TATCGCTCTT GTCGCGCTGG CCTTCGCCAA TCAAGGCTGG ATGGTATTCG CCATCATGCC GTTGTTCGCT CTCGCCGGAA TCGGCACGCC GGCGTTTCAA GCCCTGGCCA CCCGGCAGGT TGATCCGGAC CGTCAAGGTC AATTGCAAGG CGTGCTGGCC TCGGCCGTCA GCCTGGCGTC GATCGCAGCG CCGCTCGCCT TCTCGACGTT CTACTTTGTC GTTCAAAACG ACTGGCCCGG AGCCATCTGG CTCTTGGTGG TCGTCATTTA TGCAATCGCG ATTCCGCTGG TTCTTCTCGG CACCCGGACC GCCCGCGCTG CGACGTGA
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Protein sequence | MMNRPLVVIF ATICLDAVGI GLVFPVLPRL LEDVTHSPNI APYIGIMTAL YAVMQFVFAP VLGALSDNLG RRPVLLISLA GAAINYVIMA FAPQLWMLML GRAVAGLTSA NVSVATAYIT DISSEDQRAR RFGLSNAMFG IGFIIGPVLG GLLGDTWLRL PFIAAAALNA GNLLLALFVL PESRTAAREK IDLVALNPLR PLRWVFAIKG LLPVVFVYFI LSATGEAYGV CWALWGFDTF QWSGLWIGLS LGAFGICQTL VQALLPGPAT KLLGERMAVV VGIACACIAL VALAFANQGW MVFAIMPLFA LAGIGTPAFQ ALATRQVDPD RQGQLQGVLA SAVSLASIAA PLAFSTFYFV VQNDWPGAIW LLVVVIYAIA IPLVLLGTRT ARAAT
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