Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2061 |
Symbol | |
ID | 3974019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2256253 |
End bp | 2257293 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925169 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_531934 |
Protein GI | 90423564 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.232183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.150463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCAGA TTATCCGCAT TGGGATGGAT ACGTCGAAGC ATTTTTTCCA GCTGCACGGG GTCGATGCCG CCGAGAAGCC GGTGCTGCGC AAGAAGCTGC GGCGCAAGGA GATGCTGGCG TTCTTCGCCA AGCTGCCGCC GACGCCGATC GGGATCGAGG CCTGCGGTGC GGCGCACTAC CTGGCGCGGG AGCTGGGCAA ACTCGGCCAC GTGGTGAAGC TGTTGGCGCC GCAGCACGTC AAGCCTTACG TCAAGCGCAA CAAGAACGAC GGGCGCGACG CCGAGGCGTT GTGCGAGGCG ATGAGCCGGC CGACGATGGA GTTCGTGCCG GTGAAGACCG CGGAGCAGCA GGCGGCGCTG ATGCTGATGG GACTGCGGCA GCAGCTGATC GCAAGGCGTA CCCAGCTGAG CAATGCGATT CGCGGTTATG CCGCGGAATT CGGCCTGATC TCGCCGAGAG GTCTCGACAA GATCGAGCCG CTGCTGTTGC GGATCGCGCA GGACGACACC GTGCCGACGC TGGCGCGCGA GCTGTTCGCG CTGCAGGGCC AGGACTACGC GCGACTGCAG AATGAGCTGA AGGTGATCGA CGCCAAGCTG TTGGCCTGGC ATCGCGCCGA CGCCTGCAGC CGGCGGCTGG CGCAGATTCC CGGAGTAGGA CCGATCGGCG CCAGTGCGCT GGTGATGAAA ACGCCGGTGC CGCAGACCTT CGCCTCGGCC AGGGCCTTTG CGGCCTGGCT CGGCTTGACG CCGAAGGATC ATTCCACCGC CGGCAAGCTT CGGCTCGGCA CCATCACCCG CGCCGGCGAT GAACTGCTAC GCAGCCTGTT GGTGGCGGGA GCGACCGCGG TGATCCAGCA GGTGCGCCGT GGCCGCGGCC GGGCGTCGCC GTGGTTGCTG GCGCTGCTGG CGCGCAAGCC GCCCAAGCTC GCGGCGGTAG CGCTCGCCAA CAAGATCGCC CGGATCGCCT GGAAGCTGAT GCTGACCGGA GAAAATTACG ACGGCGCGCG GATGCTGAAC GCATCGCCGC ACGCCGCCTG A
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Protein sequence | MEQIIRIGMD TSKHFFQLHG VDAAEKPVLR KKLRRKEMLA FFAKLPPTPI GIEACGAAHY LARELGKLGH VVKLLAPQHV KPYVKRNKND GRDAEALCEA MSRPTMEFVP VKTAEQQAAL MLMGLRQQLI ARRTQLSNAI RGYAAEFGLI SPRGLDKIEP LLLRIAQDDT VPTLARELFA LQGQDYARLQ NELKVIDAKL LAWHRADACS RRLAQIPGVG PIGASALVMK TPVPQTFASA RAFAAWLGLT PKDHSTAGKL RLGTITRAGD ELLRSLLVAG ATAVIQQVRR GRGRASPWLL ALLARKPPKL AAVALANKIA RIAWKLMLTG ENYDGARMLN ASPHAA
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