Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1997 |
Symbol | |
ID | 3973788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2172794 |
End bp | 2173573 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637925107 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_531872 |
Protein GI | 90423502 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACA GAAATGCACT TGTCACCGGC TCCACAAGTG GAATCGGTCT GGCGACCGCG CGCGAACTGG CCAATCGTGG CTGCCACGTC ATGCTCAACG GCTTCGGTGA CGCCGGGGAG ATCGATCGGC TGTGCGCCGA GATCGCCGCG CGCAGCGGGA CCAAGGTCGT CCACTCCGGC GCCGACCTCA GCCGGCCGGA AGAAATCCGC ACTATGCTGG CGCAGGCGGA CGAAGCCTTG GGCCCGCTCG ACATCGTGGT GAACAACGCC GGCACGCAGC ATGTCTCGCC GGTGCAGAAC TTTCCCGACG AGAAATGGGA TCTGTTGCTC GCGGTGAATC TGAGCGCTGC ATTCCACATC ATCAAGGCCG TGGTGCCCGG GATGATGCAG CGGGGCTGGG GGCGGATCGT CAACACCTCG TCGGTGCTCG GGATGGTGGG CGCGCCGCAC AAGCCGGCCT ACGTCGCCTC GAAGCACGGC CTGATCGGCC TGACCAAATC GGTGGCGATC GAAGTCGCCG AGCACGGCGT CACCTGCAAC GCGGTGTGTC CGGGCACGGT GCTGACCGCG ATCATCGAAA AGCAGATCGC TCAGCAAGCG CTGGCCACCG GCCTGCGTGA GGATCAGGTG ATGAAGGAAG TCTTCCTCCG CGAAATCCCG ACGAAAAAGA TCATCCCGCC CGAACACCTC GCCGCCACCA TCGCCTTCCT GTGCTCGGAG GAGGCCGGCT CCATCACCGG CGCCGCCATC GCCGTGGACG GCGGCTACAC CGCGCACTGA
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Protein sequence | MKNRNALVTG STSGIGLATA RELANRGCHV MLNGFGDAGE IDRLCAEIAA RSGTKVVHSG ADLSRPEEIR TMLAQADEAL GPLDIVVNNA GTQHVSPVQN FPDEKWDLLL AVNLSAAFHI IKAVVPGMMQ RGWGRIVNTS SVLGMVGAPH KPAYVASKHG LIGLTKSVAI EVAEHGVTCN AVCPGTVLTA IIEKQIAQQA LATGLREDQV MKEVFLREIP TKKIIPPEHL AATIAFLCSE EAGSITGAAI AVDGGYTAH
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