Gene RPC_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1988 
Symbol 
ID3973779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2164075 
End bp2164608 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID637925099 
Producthypothetical protein 
Protein accessionYP_531864 
Protein GI90423494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCGC ATCCGCTCGC CGTCGTCGTG CACAGCAAAG GCGATCCGCT CGAACAGACA 
TTGGCCGCGG CGCGCGATCG GCTGGCTGGC CGTCCCGGAA TCCGGATCGC CGGCCTGGTG
CCGCGGTTCG GGGCGCAGCA TTCCAACGGC CGCGCTTCGC TGTGGCTCGA CGACATCGGG
CGCGGCGATG CCATCGCCTT GTCGCAGGAT CTCGGCGCCG GATCGACCTC GTGCATTCTT
AGCGCCGATG GCCTTGCCAC GGCGCGGCTC CGGCTGGCCG AGGCGATCGC AACGCGGCCG
GATCTGATGT TTTTCGGACG CTTCGCCAAG GAGGAGCTCG CAGGTCGCGG CATTCGCGAG
GAGATCGGGC TGGCGCTCGT CGAAGGCATT CCGGCGCTGG TTGCGGTGGA GCAATCGATG
CTGCCCGGCT GGAGCGAATT CGCCGGCGAA GACTGGACCG CGCTCAGCCT CGATGTCGAG
GCGATCGTCG GCTGGTTCGC CGCGCTCGAA CAAGAGGCTG CGGCGAGCGC CTGA
 
Protein sequence
MAPHPLAVVV HSKGDPLEQT LAAARDRLAG RPGIRIAGLV PRFGAQHSNG RASLWLDDIG 
RGDAIALSQD LGAGSTSCIL SADGLATARL RLAEAIATRP DLMFFGRFAK EELAGRGIRE
EIGLALVEGI PALVAVEQSM LPGWSEFAGE DWTALSLDVE AIVGWFAALE QEAAASA