Gene RPC_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1967 
SymbolhmuV 
ID3973640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2141202 
End bp2142011 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content70% 
IMG OID637925078 
Producthemin importer ATP-binding subunit 
Protein accessionYP_531843 
Protein GI90423473 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGAT TTCTCGACGC CGAGGCCGCC TCGTTCGCGA TCGGTGGAGC GACGCTGCTC 
GACCGCATCG ACCTGCGCAT CGACCGAGGC GAACTGATCG CCATCGTCGG GCCGAACGGC
GCCGGCAAGT CGACGCTACT GCGGCTGCTG TCCGGCGACC TGCGCCCGAC ACGCGGCGCG
GTGAGCCTGC AACAGCGCGC GATCCACAGC TACGCGCCGC GCGAATTGGC ATCGCGGCGC
GCGATGCTGT CGCAGCACGT CAATGTCAGC TTCCCGTTCA CGGTCGAGGA AGTGGTCTGG
ATGGGAGCCG GCGACCGCGG CCGCGGCACG TCCCAATCGC TAGTGGACGC CGCCTTGCAC
GAGGTCGGCC TCGACGCGTT TCGCGATCGC CAGCTTCCGA CGCTGTCCGG CGGCGAGCAG
CAGCGCGCGC ATTTCGCCCG CGTGCTGGTG CAGCTGCGCT GCGGCGAGGT CGAGCACGGC
CCCGGCCTGC TGCTGCTGGA CGAGCCGACT TCAAGCCTCG ACCTGCGTCA CCAGATCGAT
TTGGCCGGCA CCGCGCGCCG CTGCGCGCGC AACGGCACCA CCGTGATCGC GATCCTGCAC
GACATCAACC TCGCCGCCCG CTTCGCCGAC CGGATCGTCG TCTTGCACCA GGGCCGGCTC
GCCGCGGACG GCGCACCGAG CCAGGTGATC GAGAACTCGC TGATCCGGCG GGTATTCGAC
ATCGCGCTCG TGGTGCGGAC CGCCGAGGAC GGCGTGCCGT TCTTGCTGCC TCAGATGATC
GACGCGGCCC GGCCGCAAAG CGAAGGCTAG
 
Protein sequence
MSGFLDAEAA SFAIGGATLL DRIDLRIDRG ELIAIVGPNG AGKSTLLRLL SGDLRPTRGA 
VSLQQRAIHS YAPRELASRR AMLSQHVNVS FPFTVEEVVW MGAGDRGRGT SQSLVDAALH
EVGLDAFRDR QLPTLSGGEQ QRAHFARVLV QLRCGEVEHG PGLLLLDEPT SSLDLRHQID
LAGTARRCAR NGTTVIAILH DINLAARFAD RIVVLHQGRL AADGAPSQVI ENSLIRRVFD
IALVVRTAED GVPFLLPQMI DAARPQSEG