Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1946 |
Symbol | |
ID | 3973578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2118564 |
End bp | 2119799 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637925057 |
Product | inner-membrane translocator |
Protein accession | YP_531822 |
Protein GI | 90423452 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.939983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACA CGTCGAAATT CGCCGATATC GCCCTCTTGA TCGGCTTCGC AATCGTGGTG GCGCTCGGGC CGGTGATCTT CACCCCGATC GGCGCCGGCT ATCCCGACCT GCTGCAGAAG TTCGCGATCT ACGGCGTCTT CGCGATCGGC TTTAACATCC TGTTCGGTCT CACCGGCTAT CTGTCGTTCG GCCACGCCGC GTTTCTCGGG GTCGGCTCCT ACGCCGCGGT GTGGTCGTTC AAGCTGGTGT CGATGGACCT GTTGCCGGCG GTGGCGTTCT CGGTCGTCCT CGCGGGCGTG CTGGCGCTGG CGATCGGATT CATCAGCCTG CGGCGCTCCG GCATCTACTT CTCGATCCTG ACGCTGGCGT TTGCGCAGAT GTGCTACAAC ATGGCGTATT CGGTGCTGAC GCCGATCACC AATGGCGAGA CCGGATTGCG CGTGCTGCGT CAGGATCCAC GCCATCTCGA CGCCATGTTC GGTTACGTGT CGCCGACGCC GTCGCTGCTC GGCCTGCCGA TCACCGGCTG GACCGGCTTC TACATTTGCG GCGCGGTGCT GGTCGCGGCG TTCGGCCTGT CGATCGCAAT CTTCCGTTCG CCGTTCGGCA TGACGCTGCG CGCCATCAAG TCGAACCAGA ACCGAATGGG CTACACCGGC TATCATACGC GGCCGTATCT GCTGTCCGCC TTCGTGATCT CGGGCATGTT CGCCGGCCTG GCCGGCTCCT TGCTGGCGGC GACCGATCCG TTGGTCGGCG CCGAGCGCAT GCAATGGACC GCCTCGGGCG AAGTGGTGCT GATGACGATT CTCGGCGGCG CCGGAACGCT GCTCGGCCCG GTGCTCGGCA CCGGCCTGAT CAAGTATTTC GAGAACATCT TCTCGGCCTA CAACGAGCCG CAACTCACAG CCGTGTTTGC CTTCTTGCCG GACGGAGTCC GCGAGTTGGT GGTCAAGACG GCCGGGCTGT TCGTGGGCGA AGGCTGGCAG CTCACGTTGG GCCTGTTGTT CATGGCGGTG GTGATCTTCC TGCCCGGCGG CATCATGGAA GGCATCAACC GGCTGCTCGG CTTCAAGCAT ACGCCGAGGG TCAAGTCGCT CGGCGACTCG CCGCAGCGCG ATGCCCTCGG TGAGAGCGTG ATCGAGGAGA TGCCGTCGAG CCACGGCGCG GCGGCGGCGG AAAAGAAGGT CGCCGAGCAC GAGACTGCCG AGAAGAAGAG GGCCGTTGCG CCATGA
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Protein sequence | MKHTSKFADI ALLIGFAIVV ALGPVIFTPI GAGYPDLLQK FAIYGVFAIG FNILFGLTGY LSFGHAAFLG VGSYAAVWSF KLVSMDLLPA VAFSVVLAGV LALAIGFISL RRSGIYFSIL TLAFAQMCYN MAYSVLTPIT NGETGLRVLR QDPRHLDAMF GYVSPTPSLL GLPITGWTGF YICGAVLVAA FGLSIAIFRS PFGMTLRAIK SNQNRMGYTG YHTRPYLLSA FVISGMFAGL AGSLLAATDP LVGAERMQWT ASGEVVLMTI LGGAGTLLGP VLGTGLIKYF ENIFSAYNEP QLTAVFAFLP DGVRELVVKT AGLFVGEGWQ LTLGLLFMAV VIFLPGGIME GINRLLGFKH TPRVKSLGDS PQRDALGESV IEEMPSSHGA AAAEKKVAEH ETAEKKRAVA P
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