| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1907 |
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| Symbol | |
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| ID | 3973463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2080426 |
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| End bp | 2082300 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637925018 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_531783 |
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| Protein GI | 90423413 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0135977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCG CACGGTTTGC GTTGCTGCTT GCTGCGTCTG CGTTGACGCT GTCCGTTCCA
TCTGGGAACG CGGCGTTCGC CAATGACAAG CTGGTTGAAT TGGCGAAAAG CAACCAGAAT
TGGGTGATGC CGGGGAAGAA CTACAACTCC GACAATTTCA GCCCGATGAC CCAGATCGAC
GACAAGAACG TCAAGCAATT GAAGGCGGCC TGGAGCTTCT CGACCGGCCT GCTGCACGGC
CATGAAGGTG CGCCGTTGGT GGTCGACGGC GTGATGTACG TCCACACCTC GTTTCCCAAC
TATACGTTTG CACTCGACCT GAAGGACCCG GGCCACATCT TGTGGCAGCA TAAGCCGAAG
CAGGACCCCG CGGCGCGCTC GGTGGCGTGT TGCGATCTGG TCAATCGCGG CCTGGCCTAT
TGGCCGGGCG ATGGCTCCAC CCCGCCGCTG ATCCTCAAGA CCCAGCTCGA CGGCAATGTG
TTGGCGCTCA ACGCCAAGAC CGGCGACGAA TTCTGGAAAG TGGAGAACTC CGACATCAAG
GTCGGCTCGA CGCTGACCAT CGCGCCTTAT GTGGTGAAGG ATCTGGTGCT GATCGGATCG
TCGGGCGCCG AGCTCGGCGT GCGCGGCTAC GTCACCGCCT ATGACGTCAA GACCGGCGCG
CAGAAATGGC GCTATTACGC CACCGGGCCG GACGAGGACA TCGGCCTGGC CGACGACTTC
AACAAAGCCA ATCCGCATTA CGGCCAGAAG GGCCTCGGCA CCGCGACCTG GGAAGGCGAC
GCCTGGAAGA TCGGCGGCGG CACCAATTGG GGTTGGTACG CTTACGATCC CGGCACCGAC
CTGTTCTATT ACGGCTCGGG CAACCCGGCG CCGTGGAACG AGACCATGCG GCCCGGCGAC
AACAAATGGA CCATGACGAT CTGGGGCCGC GACGCCGAAA CCGGCAAGGC CAAGTTCGGC
TACCAGAAGA CCCCGCACGA CGAGTGGGAC TATGCCGGCG TCAACGTCAT GATGCTGTCG
GATCAGAAGG ACAAGAACGG CAAAGCGCGC AAGCTGTTGA CCCATCCGGA TCGCAACGGC
ATCGTCTATA CGCTCGACCG CGAGAACGGC GAGCTGGTCT CGGCCGATAA GATCGACGAC
ACCGTGAACG TCTTCACCCA GGTCGATCTG AAGAGCGGCG TCCCGATCCG GGTGCCGGAG
AAGGCCACAA GGATGGATCA CGTCGCTCGC GACGTCTGCC CGTCGGCGAT GGGCTATCAC
AATCAGGGCC ACGACAGCTA CGACCCGGAT CGCCAGCTGT TTTTCATGGG CATCAACCAC
ATCTGCATGG ATTGGGAGCC GTTCATGCTG CCCTATCGGG CCGGCCAGTT CTTCGTCGGC
GCCACCTTGT CGATGTATCC GGGGCCGAAG GGCGATCGCC AGAACTCGCT CGGGCTCGGC
CAGATCAAGG CCTACAACGC CATCAGCGGC AAATACAAAT GGGAGAAGAT GGAGAAGTTC
GCGGTCTGGG GTGGCACGCT CGCGACCAAG GGCAATCTGG TCTTCTACAC CACGCTCGAC
GGCTTCCTGA AGGCGCGGCA CGCCGACACC GGCGAGTTGC TGTGGAAGTT CAAGCTGCCG
TCCGGCGGCA TCGGCTATCC GATGACCTAC GAGCACGACG GCGTGCAATA CGTCGCGGTG
ATGTACGGCG TCGGCGGCTG GCCGGGCGTC GGCCTGGTGT TCGATCTGCA GGATCCGACC
GCCGGTCTCG GCGCGGTCGG CGCGTTCAAG GAACTGCAGA ACTACACCCA GATGGGCGGC
GGCGTGATGG TGTTCTCGCT CGACGGCAAG GGCCCCTATG ACGACGTCAA GGTCGGCGAG
TTCGAGGCCA ACTGA
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| Protein sequence | MKRARFALLL AASALTLSVP SGNAAFANDK LVELAKSNQN WVMPGKNYNS DNFSPMTQID
DKNVKQLKAA WSFSTGLLHG HEGAPLVVDG VMYVHTSFPN YTFALDLKDP GHILWQHKPK
QDPAARSVAC CDLVNRGLAY WPGDGSTPPL ILKTQLDGNV LALNAKTGDE FWKVENSDIK
VGSTLTIAPY VVKDLVLIGS SGAELGVRGY VTAYDVKTGA QKWRYYATGP DEDIGLADDF
NKANPHYGQK GLGTATWEGD AWKIGGGTNW GWYAYDPGTD LFYYGSGNPA PWNETMRPGD
NKWTMTIWGR DAETGKAKFG YQKTPHDEWD YAGVNVMMLS DQKDKNGKAR KLLTHPDRNG
IVYTLDRENG ELVSADKIDD TVNVFTQVDL KSGVPIRVPE KATRMDHVAR DVCPSAMGYH
NQGHDSYDPD RQLFFMGINH ICMDWEPFML PYRAGQFFVG ATLSMYPGPK GDRQNSLGLG
QIKAYNAISG KYKWEKMEKF AVWGGTLATK GNLVFYTTLD GFLKARHADT GELLWKFKLP
SGGIGYPMTY EHDGVQYVAV MYGVGGWPGV GLVFDLQDPT AGLGAVGAFK ELQNYTQMGG
GVMVFSLDGK GPYDDVKVGE FEAN
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