Gene RPC_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1901 
Symbol 
ID3973419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand- 
Start bp2072042 
End bp2072647 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content68% 
IMG OID637925012 
ProductTetR family transcriptional regulator 
Protein accessionYP_531777 
Protein GI90423407 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.665453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGG GTCGACCCCG CGCCTTCAAC GCCGACAAGG CGTTGGACGA AGCGATGGAG 
ATCTTCTGGC GGCACGGTTA CGAGGGCGCG ACGATCGCGC AACTCACTGA CGTCATGGGC 
ATAAATCCGC CGAGCCTGTA TGCGGCGTTC GGCAGCAAAG AAGGCCTGTT GCGGGCCGCG 
CTGGACCGTT ACACCGCCAA ACGGGCGGCC TTTCTGACGG AAATTTTACA AGCGCCGACC 
GCCCGCGCGG TGGCCGAAAA GCTGTTGATG GGGATCGCCG ACGTTCAGAC CGACCCCTCG 
CATCCGCCGG GCTGCCTGCT GGTGCAAGGC GGGCTCGCCT GCGGCAGCGG CTCGGAGAAC 
GTGCCGTTCG AGCTGGCGTC GCGCCGCGCC GAAACCGAGG ACCGGCTGCG GCAACGCTTT 
GAACAGGCCA AGGCCGAGGG CGATCTCACC GCCACCGCCG ACCCCTGCGC GCTGGCGCGC 
TATCTTTCGG CGGTCACCGT GGGCATGGGC GTGATGGCGT CGTCCGGCGC CGGGCGCGAG 
GAGCTGCGCG AGATCGCCAG CCTGTCGCTG AAGGCGTTCG AGCAGCAGGC CGCGACAGTC 
AGCTAG
 
Protein sequence
MAMGRPRAFN ADKALDEAME IFWRHGYEGA TIAQLTDVMG INPPSLYAAF GSKEGLLRAA 
LDRYTAKRAA FLTEILQAPT ARAVAEKLLM GIADVQTDPS HPPGCLLVQG GLACGSGSEN 
VPFELASRRA ETEDRLRQRF EQAKAEGDLT ATADPCALAR YLSAVTVGMG VMASSGAGRE 
ELREIASLSL KAFEQQAATV S