| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1867 |
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| Symbol | |
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| ID | 3973384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2031348 |
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| End bp | 2033315 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924978 |
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| Product | ABC transporter related |
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| Protein accession | YP_531743 |
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| Protein GI | 90423373 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGTT CGACCATCGT GCTGCGCGGC CTGCGCCGGG AATATCCCTC CGGCGAAGCC
ACCGTGGTGG CGCTGCGCGA CCTCGATCTG ACCATCGAGC CCGGCGAGAT GGTCGCGGTG
ATGGGCGCGT CGGGCTCCGG CAAATCGACG CTGATGAACA TTTTGGGCTG CCTGGACCGA
CCGAGTTCGG GGAGCTACCA GATCGCCGGC CGCGAAACCG CGTCGCTCGA CGCCGACGAA
TTGGCGGCGC TGCGCCGCGA ACATTTCGGC TTCATCTTCC AGCGCTACCA TCTGCTGCCG
GAATTGAGCG CCCTCAGCAA CGTCGAAATC CCGGCGATCT ACGCCGGGCA GAGCCGCGAT
GAGCGGCGCG ACCGCGCCAA TGGCCTATTG GCACGGCTCG GCATCACCGA CCGCGCCAGC
CACCGGCCGA ACCAGCTGTC CGGCGGTCAG CAGCAGCGGG TGTCGATCGC CCGCGCGCTG
ATGAACGGCG CCGACGTCAT TCTGGCCGAC GAGCCGACCG GCGCGCTCGA CCGCCGCAGC
GGCGACGAGG TGCTGCGGAT TCTCGACGAG CTGCACGCCG ACGGCAAGAC CGTGATCATC
GTCACCCACG ATGCGTCGGT GGCGGCGCGG GCCAAACGAG TGATCGAACT CAGCGACGGC
GTCGTGATCG CCGACCGCGC CACGTCGACC GTGTCCCCCG CGGTCGCAGC CCCGACGGCC
GCTGCGGCAC AAGCCCAGCC CCGATCGCGA TGGCCGTGGC AAAGCCGGCT CGACCGCATC
GGCGAAGCGT TCCGGATGGC GATGCTGGCG ATGGCCGCGC ACCGGCTGCG CACCTTCCTG
ACCATGCTCG GCATCATCAT CGGCATCGCC TCGGTGGTGT TCATCGTCGC GGTCGGCGAC
GCGGCCAAGC GCAAGGTGCT GGCGGACATC TCGAGCCTCG GCACCAATAC GATCGAGATT
TTTCCGGGCA AGGACCTCGG CGACGTGCGC TCTTCCAAGA TCAAGACGCT GGTGGTGGCG
GACGCGCGCG CGCTGCGGCT GCAACCTTAC ATCGACGGCG TGACGCCGAC GGTCTCGACC
AGCAGCACGT TGCGCCACGG CCCGCTCGAG GCCAACGCGC TGGTCAACGG CGTCGGCGAT
CAGTATTTCG CGGTGAAAGG CACCAAATTG TCGGCCGGCC GGTTTTTCGA CGCAGACGGC
CTGCGCGATG TCAGCCAGGA CGTGGTGATC GACGAAAAGA CAAGGCAAAC GTTCTTCAGC
GACGATCCGG ATGGCCCGAT CGGCAAGGTG CTGCTGGTCG GCCGGGTGCC GTGCCGAATC
ATCGGCGTGA CGCAACAGCA GCAGGGCGGC TTCGGCTCCA GCCAGAATCT CTCGGTGTAT
CTGCCCTACA CTACGGTGCA GGCGCGCTTT CTCGGCAACT CGTCGCTGCG CAGCATTTTG
GTCAAGGTCA ACGACGAGGT CACCACCAAA GCCGCCGAAC TGGATGTCAC CCGGTTTCTG
ACGTTGCGGC ATCGCGTGAA GGATTTCGTG ATTCTCAACA CCGACGACAT TCGCAAGACC
ATCACCAACA CCACCGAGAC GTTGACGCTG ATGATCGCCG CGATCGCGGT GATCTCGCTG
GTGGTCGGCG GCATCGGCGT CATGAACATC ATGCTGGTGT CGGTGTCCGA GCGGGTCGGC
GAAATCGGGG TACGGATGGC GGTCGGCGCG CGGCGCAGCG ACATCCTGCA GCAATTCCTG
ATCGAAGCGG TGATGGTGTG CCTGATCGGC GGCGGCCTCG GCGTCGCCGT CGCCTATGGC
CTCGCCGCCA CCTTCAACGC GCTGGTGCCG ATGTTTCAGC TCGGCCTGTC GGCCGGCTCG
ATCATCGCCG CATTCATCTG CTCGACCGGC ATCGGCGTGG TGTTCGGCTA TCTGCCGGCC
CGCCAAGCCT CGTTCCTCGA TCCTTTGGCG GCTTTGTCGC GCGACTGA
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| Protein sequence | MARSTIVLRG LRREYPSGEA TVVALRDLDL TIEPGEMVAV MGASGSGKST LMNILGCLDR
PSSGSYQIAG RETASLDADE LAALRREHFG FIFQRYHLLP ELSALSNVEI PAIYAGQSRD
ERRDRANGLL ARLGITDRAS HRPNQLSGGQ QQRVSIARAL MNGADVILAD EPTGALDRRS
GDEVLRILDE LHADGKTVII VTHDASVAAR AKRVIELSDG VVIADRATST VSPAVAAPTA
AAAQAQPRSR WPWQSRLDRI GEAFRMAMLA MAAHRLRTFL TMLGIIIGIA SVVFIVAVGD
AAKRKVLADI SSLGTNTIEI FPGKDLGDVR SSKIKTLVVA DARALRLQPY IDGVTPTVST
SSTLRHGPLE ANALVNGVGD QYFAVKGTKL SAGRFFDADG LRDVSQDVVI DEKTRQTFFS
DDPDGPIGKV LLVGRVPCRI IGVTQQQQGG FGSSQNLSVY LPYTTVQARF LGNSSLRSIL
VKVNDEVTTK AAELDVTRFL TLRHRVKDFV ILNTDDIRKT ITNTTETLTL MIAAIAVISL
VVGGIGVMNI MLVSVSERVG EIGVRMAVGA RRSDILQQFL IEAVMVCLIG GGLGVAVAYG
LAATFNALVP MFQLGLSAGS IIAAFICSTG IGVVFGYLPA RQASFLDPLA ALSRD
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