| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1812 |
|---|
| Symbol | |
|---|
| ID | 3971807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1966497 |
|---|
| End bp | 1967258 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637924925 |
|---|
| Product | peptidase S1 and S6, chymotrypsin/Hap |
|---|
| Protein accession | YP_531690 |
|---|
| Protein GI | 90423320 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5640] Secreted trypsin-like serine protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.160916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.225643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCT TGTTGTTTCA ACTGCTCGCG CTCGCGCTCG CTTTCGCGCC CCCCGCCGCG
GCAATGGTCG GCGGCGCGAC GCCGAGCGAG GACGGCGTCG GCCGCAGCGT CGTCACCATC
GTCGGCTCGC GCGGCAATTT CTGCTCCGGC GCGCTGATCG CGCCGGATCT GATCTTGAGC
GCGGCGCATT GCGTGCCGCC CGGCGCCGAA TTCAAGATCG TGTTGTACGA CGCAGCCAAG
CAGCCGATGC TGCGCGATGT GCGGCGCGTG GCGCGGCACC CCGGCTTCAA TGCGCAGGGC
ATCGCCGCGC ATCGCGCCAG CGCCGACGTC GCGCTGCTGC AGCTCGCCGA ACCGCTGCGC
GACAAACCGC CCGCCCTCAC CGCGGCGCCG CTGGAGCCGA TCCTCGCCGG GCAGAGCTTC
ATCGTCGCCG GCGTCGGCGT CGCGCAACGC GGCGACGGCA AGAGCGGCGG CGTGGTGCGC
GCCGCGCAGC TGGTTGCGAC CTCGCATCCC GGCCGGCTGC AGATCCGCCT GGTCGATCCG
GTGAGCAATA ACGCTCACGC CGGCCAAGGC GCCTGCACCG GCGATTCCGG CGCGCCGGTA
TTTCAACAAC AGAACGGCCA CGCGGTGATC GTGGGCGTGG TGTCGTGGTC GACCGCCGCC
AACAACGCCG CCGGCTGCGG CGGCCTCACC GGCGCGACGC CGCTGTCGCT GTACCGCGAC
TGGCTGCTGC GCACCGCGAA GAGCTGGGGC GCCGCGCTGT AG
|
|---|
| Protein sequence | MTRLLFQLLA LALAFAPPAA AMVGGATPSE DGVGRSVVTI VGSRGNFCSG ALIAPDLILS
AAHCVPPGAE FKIVLYDAAK QPMLRDVRRV ARHPGFNAQG IAAHRASADV ALLQLAEPLR
DKPPALTAAP LEPILAGQSF IVAGVGVAQR GDGKSGGVVR AAQLVATSHP GRLQIRLVDP
VSNNAHAGQG ACTGDSGAPV FQQQNGHAVI VGVVSWSTAA NNAAGCGGLT GATPLSLYRD
WLLRTAKSWG AAL
|
|---|
| |