| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1772 |
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| Symbol | |
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| ID | 3972211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1925968 |
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| End bp | 1927617 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924885 |
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| Product | hypothetical protein |
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| Protein accession | YP_531650 |
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| Protein GI | 90423280 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.707958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0570735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCCA TAACGACTTC TTCCTTCGAT ACGCCCGTGC GGCGCTCGGC GGAACGAACT
TGCGACGACC TTTCGATCGC GGCGTTGGCC GTGGTCAGCC TGATCGCAGG GCTGACATTT
CGCGACTACG GGCTGGGCTG GGACGATTAC ACCCACGCCG AATACGCCGA TCTACTGTTG
CGAATGTACG GCTCCGGCTT CCGCGATACC GCCGCGCTAT CGTTTGCCAA TTTATACATG
TATGGCGGCG GCTTTGATAT CGCAGCGGCG CTGCTGCACA AGATCATTCC GCTGGAATTG
TTCGAAACCA GGCGGCTGCT CGGCGCGGTG GTCGGCGTCA TCGGCTTGGC GGTGACCTGG
CGGCTGGCGC GCCGGGTCGG CGGTCCGTTC GCCGGGCTCG CGGCGCTGTT GCTGCTGGCG
CTGTGCCCGA CCTTCTACGG CCACATGTTC ATGAATCCGA AGGATGCGCC GTTCGCCGTG
GCGATGGTGA TCCTGATGCT CGGCCTGGTT CGCCTCGCCG AAGAATATCC CCGGCCCTCG
CCGCACACCG TGCTGATCGT CGGGCTCGGC GCCGGGCTGT CGATCGGCTC GCGGATCCTC
GGCGGTCTGG CGCTGGTCTA TGCGCTGATC GGCTTCGTGC CGCTGCTGAT TGAGGAAGTC
CGCAGCAACG GCCTGCGCGA AGCCGCGCGC CGGTTTGCCC AGATGAGCTA CGCGCTGATC
CCCGGCCTGA TCTTCGGCTA CTTGGTGATG GGGCTGATCT GGCCGTGGTC GATCATGGAG
CCGGCCAATC CGCTGCGCGC CCTGACCTAT TTCTCGCATT TCTTCGAAAA GCCCTGGAAA
GAGATGTTCG ACGGCGCGCT GGTGTCGGTG CCGGACATGC CGTGGTCCTA CCTGCCGACG
CTGTTCGCGC TGCAACTGCC GGAAGTGCTG CTTGGGCTGG CCGCCGGCGG CGTGGTGATG
ACCATCGTGG CGCTGTCGCG CGACACCGTG ACGCCGCGGC GCAAGACCAT CCTGCTGATG
CTGACGGTGG CGGCGACGCT GCCGCTCGTC ATCGCCATGG TGAAACGCCC GGCGCTGTAC
AACGGCATCC GGCATTTCAT CTTCGTGATC CCGCCGATGA CGGTGCTGGC CGGCGTCGCT
TTAGCGCGGT TGATGGATTG GATCGGCGCC CGCCACCTCG GCTCGCAGGC CGCGGCGGTG
GCGATCTTCG CGTTCGGGCT GATGCTGCCG TTGGCCGAAA TGATCCGGCT GCATCCCTAT
CAATACACCC ACTTCAACCA CGTCGCCGGC ACCGTGCGCA GCGCCGAATC GCTGTTCATG
CTGGACTATT GGGGTCTAGC GCTAAAGCAG GCCTCGGACG CGCTGCGCGA CGAAATCGCC
GAGCGCGAGG AAGTGCCGCC GCGCGGGCGC AAGTGGAAGG TCGCGGTGTG CGGCCCGCAG
CGCCCGGCGC AGGTTGCGCT GGGGCCGGAC TTCACCATCG GCTGGGACAG CCACGCCGCC
GACTTCGCCA TGACGCTCGG CGAATTCTAC TGCAAAGGCC TGACCGCGCC GATCATCGCC
GAGATCAAGC GCGACGACGT GGTGTTCGCG CGGGTCTACG ACATCCGCAG ACAGAGCATC
TCCAGCCTGT TGTCGATCCC GGCGCCATAG
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| Protein sequence | MSAITTSSFD TPVRRSAERT CDDLSIAALA VVSLIAGLTF RDYGLGWDDY THAEYADLLL
RMYGSGFRDT AALSFANLYM YGGGFDIAAA LLHKIIPLEL FETRRLLGAV VGVIGLAVTW
RLARRVGGPF AGLAALLLLA LCPTFYGHMF MNPKDAPFAV AMVILMLGLV RLAEEYPRPS
PHTVLIVGLG AGLSIGSRIL GGLALVYALI GFVPLLIEEV RSNGLREAAR RFAQMSYALI
PGLIFGYLVM GLIWPWSIME PANPLRALTY FSHFFEKPWK EMFDGALVSV PDMPWSYLPT
LFALQLPEVL LGLAAGGVVM TIVALSRDTV TPRRKTILLM LTVAATLPLV IAMVKRPALY
NGIRHFIFVI PPMTVLAGVA LARLMDWIGA RHLGSQAAAV AIFAFGLMLP LAEMIRLHPY
QYTHFNHVAG TVRSAESLFM LDYWGLALKQ ASDALRDEIA EREEVPPRGR KWKVAVCGPQ
RPAQVALGPD FTIGWDSHAA DFAMTLGEFY CKGLTAPIIA EIKRDDVVFA RVYDIRRQSI
SSLLSIPAP
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