Gene RPC_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1738 
Symbol 
ID3972450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1891166 
End bp1891945 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID637924851 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_531616 
Protein GI90423246 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0269497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCT ACGAATCCAT CATCGTCGAA CGCAAGGCCG CAGTCGGCCT GATCCGGCTC 
AATCGTCCGA AACAACTCAA CGCGTTGTCG TTCGGGGTGT TGGGCGAGAT CGCGCTGGCG
ATCGACGAAT TGGAAGCCGA CGCCGCGATC GGCTGCATCG TGCTGACCGG CAGCGAGAAG
GCGTTCGCCG CCGGCGCCGA CATCAAGGAG ATGCAGCCGA AGGGCTTCAT CGACATGTTC
AACGCCGATT TCACCGCGAT CCGCGGCGAC CGCGTCGCCA CTTGCCGCAA GCCGACCATC
GCGGCGGTCT CCGGCTACGC GCTCGGCGGC GGCTGCGAAT TGGCGATGAT GTGCGACTTC
ATCATCGCCG CCGAGACCGC CAAATTCGGC CAGCCGGAAA TTACCCTCGG CACCATTCCG
GGGATCGGCG GCACGCAGCG GCTGACCCGC GCGGTCGGCA AAGCCAAGGC GATGGATTTA
TGCCTCACCG GGCGGATGAT GGACGCCGCC GAAGCCGAGC GCGCCGGCCT GGTCAGCCGC
ATCGTGCCGG CGGACAAACT GATGGACGAG GCGATGGACG CCGCCGAGAA GATCGCGGCG
ATGTCGCAGC CGGCCGCGGA GATGGCGAAG CGCGCGGTGA ACCGCGCCTT CGAAACTACG
CTTGCCGAGG GCATGCAGGT GGAGCGCGAT CTGTTCCGGG CGACTTTCGC GCTGGACGAC
CGCGCCGAAG GCATGGCGGC GTTCATCGAA AAGCGCCCGG CGCAAATCCG TAACCGTTAG
 
Protein sequence
MNSYESIIVE RKAAVGLIRL NRPKQLNALS FGVLGEIALA IDELEADAAI GCIVLTGSEK 
AFAAGADIKE MQPKGFIDMF NADFTAIRGD RVATCRKPTI AAVSGYALGG GCELAMMCDF
IIAAETAKFG QPEITLGTIP GIGGTQRLTR AVGKAKAMDL CLTGRMMDAA EAERAGLVSR
IVPADKLMDE AMDAAEKIAA MSQPAAEMAK RAVNRAFETT LAEGMQVERD LFRATFALDD
RAEGMAAFIE KRPAQIRNR