Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1738 |
Symbol | |
ID | 3972450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1891166 |
End bp | 1891945 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637924851 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_531616 |
Protein GI | 90423246 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0269497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGCT ACGAATCCAT CATCGTCGAA CGCAAGGCCG CAGTCGGCCT GATCCGGCTC AATCGTCCGA AACAACTCAA CGCGTTGTCG TTCGGGGTGT TGGGCGAGAT CGCGCTGGCG ATCGACGAAT TGGAAGCCGA CGCCGCGATC GGCTGCATCG TGCTGACCGG CAGCGAGAAG GCGTTCGCCG CCGGCGCCGA CATCAAGGAG ATGCAGCCGA AGGGCTTCAT CGACATGTTC AACGCCGATT TCACCGCGAT CCGCGGCGAC CGCGTCGCCA CTTGCCGCAA GCCGACCATC GCGGCGGTCT CCGGCTACGC GCTCGGCGGC GGCTGCGAAT TGGCGATGAT GTGCGACTTC ATCATCGCCG CCGAGACCGC CAAATTCGGC CAGCCGGAAA TTACCCTCGG CACCATTCCG GGGATCGGCG GCACGCAGCG GCTGACCCGC GCGGTCGGCA AAGCCAAGGC GATGGATTTA TGCCTCACCG GGCGGATGAT GGACGCCGCC GAAGCCGAGC GCGCCGGCCT GGTCAGCCGC ATCGTGCCGG CGGACAAACT GATGGACGAG GCGATGGACG CCGCCGAGAA GATCGCGGCG ATGTCGCAGC CGGCCGCGGA GATGGCGAAG CGCGCGGTGA ACCGCGCCTT CGAAACTACG CTTGCCGAGG GCATGCAGGT GGAGCGCGAT CTGTTCCGGG CGACTTTCGC GCTGGACGAC CGCGCCGAAG GCATGGCGGC GTTCATCGAA AAGCGCCCGG CGCAAATCCG TAACCGTTAG
|
Protein sequence | MNSYESIIVE RKAAVGLIRL NRPKQLNALS FGVLGEIALA IDELEADAAI GCIVLTGSEK AFAAGADIKE MQPKGFIDMF NADFTAIRGD RVATCRKPTI AAVSGYALGG GCELAMMCDF IIAAETAKFG QPEITLGTIP GIGGTQRLTR AVGKAKAMDL CLTGRMMDAA EAERAGLVSR IVPADKLMDE AMDAAEKIAA MSQPAAEMAK RAVNRAFETT LAEGMQVERD LFRATFALDD RAEGMAAFIE KRPAQIRNR
|
| |