| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1733 |
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| Symbol | dnaE2 |
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| ID | 3972445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1883476 |
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| End bp | 1886814 |
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| Gene Length | 3339 bp |
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| Protein Length | 1112 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924846 |
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| Product | error-prone DNA polymerase |
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| Protein accession | YP_531611 |
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| Protein GI | 90423241 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.647587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00382273 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCCCG TCTATGCCGA GATCGGCATC ACCACGAATT TCTCCTTTCT GCGCGGCGGC
TCGCATCCGC AGGACTACGT GCAGCAGGCC TCTGAATTGC GGTTGCCGGT GATCGGGATC
GCCGATCACA ACACGCTCGC CGGCGTGGTG CGGGCCTATA GCGAATTGCG CAACGAGCGC
CTCGCGCACA AGCCGCGGCT GTTGATCGGC GCGCGGCTGG TGTTCATCGA CGGCACGCCG
GACATTTTGG TCTATCCGCG CGACCGCGCC GCTTACGGCC GGCTGTGCCA GCTGTTGACC
CGCGGCAAGC GCGCCGCCGA CAAGGGTGAA TGCCATCTAG GTCTCGACGA TCTCGCGGAG
TTCGCCGAAG GCCAACTGCT GGTGCTGGCG CTGCCGCATC GCTTCGAGGA CGCCGAAGCC
GGCCGGCTGC TGGCGCGGCT GCAGGGCTTT GCCGCCGACG GCGTCTGGCT GGCGGCGAGC
CTGCTGTATC GCGGCGACGA CCGCAGGCGC CTGCAGCGGC TGCAGCAGCT CGCGGCGCAA
GCAAGGCTGC CGCTGCTGGC CACCAACGAG GTGCTGTATC ATCACCCGGC GCGACGGCCG
TTGCAGGACG TGCTGAGCTG CGTGCGCGAG AAGCTCACGC TGGAGAGCAT CGGCACAAGG
CTCGAGGCCA ATGCCGAGCG GCATCTCAAG CCGGCGCAGG AGATGGCGCG GCTGTTTCGC
GATTGCCCGC AGGCGATCGC CGAGACCATG CGGTTCGCCG CGCGCATTCA GTTCTCGCTC
GATCAGTTGC AATATCAATA TCCCAACGAG CCGGTGCCGG CCGGCAAGAC CGCGCAGCGG
CATCTGGAGG ATCTGACCTG GGCCGGCGCC CACAAATATT TCCCGCGGGG CATCTCGCCG
CATCTCAAGA AGACGCTGCG CAAGGAATTG CGGCTGATCC GCAAATTGCG CTACGCGCAT
TATTTCCTCA CCGTGCACGA CATCGTCTGC TACGCGCGCT CGCAGAACAT CCTGTGCCAG
GGTCGCGGAT CGGCGGCGAA TTCCGCGGTG TGCTACGTGC TCGGCATCAC CGCGGTCAAT
CCGATCGAGA TCGATCTGCT GTTCGAACGC TTCATCTCCA AGGAGCGGCT GGAGCCCCCG
GACATCGACG TCGATTTCGA ACATTCGCGG CGCGAGGAGG TGATGCAATA CATCTATCGG
CGCTACGGCC GCGACCGCGC CGCGATCATC GCCACGGTGA TCCACTATCG CCCGCGCTCG
GCGATCCGCG ACGTCGGCAA GGTGTTGGGG CTGACCGAGG ACGTCACCTC GGCCTTGGCC
GATACGGTGT GGGGCAGTTG GGGGCGTGGC CTCAACGAGA TGCAGGTGAC GCAGGCCGGG
CTCGATCCGC GCAATCCCTT GATCGCCCGC GCCATCGATC TCGCCAGCGA GTTGATCGGC
TTTCCGCGGC ATCTGTCGCA GCATGTCGGC GGCTATGTGC TGACGGAGGA CCGGCTCGAC
AGCTACGTGC CGATCGGCAA CGCCGCGATG GACGACCGCA CCTTCGTCGA ATGGGACAAG
AACGACGTCG ACACCTTGAA GATGATGAAG GTCGATGTGC TGGCGCTCGG CATGTTGACC
TGCATCCGCA AATGCTTCGA CCTGATCGAT GCGCACAAGG GCGAACGCTG GGCGCTCGCC
ACCGTTCCGC GCGAAGTGCC GGCGGTCTAC GACATGCTGT GCCGTAGTGA ATCGCTCGGC
GTGTTTCAGG TCGAGAGCCG CGCCCAGATG AACATGCTGC CGCGGCTCAA GCCCCGCCAA
TTCTACGACC TCGTCATCGA GGTCGCGATC GTGCGGCCCG GCCCGATCCA GGGCGACATG
GTGCATCCCT ATCTGCGCCG GCGCAACGCC GAGGAGCCGG TGTACTATCC GTCGCCGTCG
CCACAGCACG GCGACAAGGA CGAACTTCGC AAGGTACTGC ACAAGACGCT CGGCGTGCCG
CTGTTCCAGG AGCAGGCGAT GCGGATCGCG ATCGAGGCGG CGAAATTTTC TCCGGAAGAA
GCCAATGGAC TACGCCGGGC GATGGCGACG TTCCGCAACG TCGGCACCAT CGGCAAGTTC
GAATCCAAGA TGGTCAACAA CATGATTTCG CGCGGCTATG ATCCGGTGTT CGCGAAAAAC
TGCTTCGACC AAATCAAGGG ATTTGGTAGT TACGGCTTTC CGGAAAGCCA CGCCGCGAGC
TTCGCACAAT TGGTCTATGT GTCGTCCTGG CTGAAGCACT TTCATCCCGA CGCGTTCTGC
TGCGGCTTGT TGAATTCGCA GCCGATGGGA TTTTATGCGC CGGCGCAGAT CGTGCGCGAC
GCGCGGACAA ACGGCGTCGA GGTGCGCGCG GTCGATGTGT CGTTCAGCTT CGGACAGAAT
ACGCTGGAGG AACGCTGCGG GCGCTATCAC GCGCTGCGGC TCGGCTTCCG CCAGATCGAC
GGTTTTCGCT GCACCGATTC TGACGCCGCC CATCTGCGGC TACAAGTCGG CCGGCCGGAA
GTGGAGGATT GGGCGGCGCG CATCGTCGAA ACCCGGCGCC GGCAACGCTT CGTCTCGCTG
GAACAGTTCG CGCGTGCGAC CGCGTTGCCG AAGCGGGCGC TGCTGCTGCT CGCCGAAGCC
GATGCGTTTC GCTCGATCGG GCTCGATCGT CGTGCGGCAC TCTGGGCGGT GCGGCGACTA
CCCGACGACG TGGCGTTGCC GCTGTTCGAA ATAAGCGCCG CGCGCGAGCA GCCGGATGAA
GCGGCGAGGC CGTTGCCGCA GATGCCGCTC GCCGAGCACG TCGTCGCCGA CTATCAGACC
ATCCGGTTGT CGCTGAAGGG CCACCCGATG GAATTTTTGC GCGCGATGTT CGATCGCGAG
CGCGTGGTGA CGTGTGCCGC GGTGTCGGCG CTGCGTCGCA ACGGACCGCG CAGCCGCTGC
GCCGGCGTGG TGCTGGTGCG GCAGCGGCCG GGCAGCGCCA ACGGCGTGGT GTTCATGACG
CTGGAGGATG AGACCGGCAT TGCCAACGTC GTGGTGTGGC CGCAGGTGCT GGAGCAATTC
CGCAAGGAAG TGATGGGCGC GCGGCTGCTG CTGGTGGAGG GAAAAATCCA GGCGAGCCCG
GAGGGTGTCG TGCATCTGGT CGCGGAAAGG CTGATCGATC GCAGCTACGA GATGGCGCGG
CTGTCGGACA ATCTGCGCAC CCGGCCGGCG CTTCCCGCAG GCGCGGCGCT GATCGAACCG
CTCAACGACG ATCGCCGCGA CCACGCCGAC AACCCCGCGC AAAAAATTCG CCACCCGCGC
GACGTCCGCA TCTTGCCGCC GTCGCGGGAT TTTCGCTGA
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| Protein sequence | MTPVYAEIGI TTNFSFLRGG SHPQDYVQQA SELRLPVIGI ADHNTLAGVV RAYSELRNER
LAHKPRLLIG ARLVFIDGTP DILVYPRDRA AYGRLCQLLT RGKRAADKGE CHLGLDDLAE
FAEGQLLVLA LPHRFEDAEA GRLLARLQGF AADGVWLAAS LLYRGDDRRR LQRLQQLAAQ
ARLPLLATNE VLYHHPARRP LQDVLSCVRE KLTLESIGTR LEANAERHLK PAQEMARLFR
DCPQAIAETM RFAARIQFSL DQLQYQYPNE PVPAGKTAQR HLEDLTWAGA HKYFPRGISP
HLKKTLRKEL RLIRKLRYAH YFLTVHDIVC YARSQNILCQ GRGSAANSAV CYVLGITAVN
PIEIDLLFER FISKERLEPP DIDVDFEHSR REEVMQYIYR RYGRDRAAII ATVIHYRPRS
AIRDVGKVLG LTEDVTSALA DTVWGSWGRG LNEMQVTQAG LDPRNPLIAR AIDLASELIG
FPRHLSQHVG GYVLTEDRLD SYVPIGNAAM DDRTFVEWDK NDVDTLKMMK VDVLALGMLT
CIRKCFDLID AHKGERWALA TVPREVPAVY DMLCRSESLG VFQVESRAQM NMLPRLKPRQ
FYDLVIEVAI VRPGPIQGDM VHPYLRRRNA EEPVYYPSPS PQHGDKDELR KVLHKTLGVP
LFQEQAMRIA IEAAKFSPEE ANGLRRAMAT FRNVGTIGKF ESKMVNNMIS RGYDPVFAKN
CFDQIKGFGS YGFPESHAAS FAQLVYVSSW LKHFHPDAFC CGLLNSQPMG FYAPAQIVRD
ARTNGVEVRA VDVSFSFGQN TLEERCGRYH ALRLGFRQID GFRCTDSDAA HLRLQVGRPE
VEDWAARIVE TRRRQRFVSL EQFARATALP KRALLLLAEA DAFRSIGLDR RAALWAVRRL
PDDVALPLFE ISAAREQPDE AARPLPQMPL AEHVVADYQT IRLSLKGHPM EFLRAMFDRE
RVVTCAAVSA LRRNGPRSRC AGVVLVRQRP GSANGVVFMT LEDETGIANV VVWPQVLEQF
RKEVMGARLL LVEGKIQASP EGVVHLVAER LIDRSYEMAR LSDNLRTRPA LPAGAALIEP
LNDDRRDHAD NPAQKIRHPR DVRILPPSRD FR
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