Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1700 |
Symbol | |
ID | 3972527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1839667 |
End bp | 1840443 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637924813 |
Product | HpcH/HpaI aldolase |
Protein accession | YP_531578 |
Protein GI | 90423208 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.689596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATA ACGTCAAACA AATCTGGGCG GCCGGCAAGG TCGCGGTCAA CGGCTGGCTG GCGATCCCGT CGGGTTTCTC CGCCGAGGTG ATGGCGCAAT GCGGCTTCGA CAGCGTCACC GTCGATCTGC AGCACGGCGT GCAGGACTAT GCCTCGATGG TGCAGTGTTT CCAGGCGATG CAGGCGCATC CGGTGACGCC GATGGTGCGG GTGCCGTGGA ACGAGCCCGG CATCATCGGC AAGGTGCTGG ACGGCGGCGC CTACGGGGTG ATCTGCCCGA TGGTGAATAC CAAGCAGGAG GCCGAAGCCT TCGTGCAAGC CTGTAAATAT CCGCCGCGCG GCACCCGCAG CAACGGCCCG ATCCGCGCCG GGCTGTACGG CTCGTCGGGC AACTACCAGA CCACGGCCAA TGACGAGACG CTGTGCATTC CGATGATCGA GACCAAGACC GCGGTCGACA ACATGGAGGC CATCCTCGAC GTCGACGGCA TCGCCGGGGT CTATGTCGGG CCGTCCGATC TTGGCTTTTC CTATGGTCTG GTTCCGAAGC TCGATCGCGA GGAGCCGGAG ATTTTGAAGA TCTACGACAA GCTGTTGAAG GAATGCGACA AGCGCGGAAT TTATCCGGGG ATCCATTGCT CGGGTCCGGC GGGTGCCGCG AAAAACATCG GCATGGGCTT CAAGCTGGTG ACGCTATTGA ACGACAGCGG CATCATGGCG ACGGGTGCGA AGGCCTGGGT CGGCGAGACG CGGAAGAACT CCGGCGGCAA GGCGTAA
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Protein sequence | MTNNVKQIWA AGKVAVNGWL AIPSGFSAEV MAQCGFDSVT VDLQHGVQDY ASMVQCFQAM QAHPVTPMVR VPWNEPGIIG KVLDGGAYGV ICPMVNTKQE AEAFVQACKY PPRGTRSNGP IRAGLYGSSG NYQTTANDET LCIPMIETKT AVDNMEAILD VDGIAGVYVG PSDLGFSYGL VPKLDREEPE ILKIYDKLLK ECDKRGIYPG IHCSGPAGAA KNIGMGFKLV TLLNDSGIMA TGAKAWVGET RKNSGGKA
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