Gene RPC_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1672 
Symbol 
ID3972732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1805032 
End bp1805697 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID637924786 
Productoxidoreductase, molybdopterin binding 
Protein accessionYP_531551 
Protein GI90423181 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.476748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG AGACCGCGCC GTCGTCCGAG TCCAAACTGA CCCAGAGCAA GCAACGCTGG 
GCGCGCGAGG GCAAGTTTCT CACGGGCCGC ACCGCGCGGC CTGCCGAGCA GCGGCTGCCG
CCCGGCCAGC ATCTGACCCG CGACTGGCCG GTGCTCGACC TCGGCGTGGT GCCACAGATC
GGCCGCGAGC GCTGGCGGCT CGATGTTCAT GGCGCGGTGG CGGCGCCGCA ATTCTGGGAT
TTCTCGCAGT TCATGGCGCA GCCGCAGGCG CAGTTCGTCT CCGACATCCA CTGCGTCACC
ACCTGGTCGC GCTACGACAA CCAATGGCAG GGGCTGCCGA CGCGCGAGCT GCTGGCGGCA
TGCCGGCCGC ACGCCGAGGC GCGCCACGTG CTGCTGCATA GTTACGACGG CTACACCACC
AATCTGGCGC TGGAAGATTT CGCCGCGGAG GATGCGTTGC TGGCGCAGGC CTGGTCCGGA
GCGCCGCTGA CCCAGGAGCA CGGCGGCCCG GTGCGCCTCG TGGTGCCGCA GCTGTATTTC
TGGAAAAGTG CCAAGTGGAT CCAGAGCATC GAATTCGTCG CCGCCGACGC GCCGGGCTAT
TGGGAGGTGC GCGGCTATCA CAACCGCGGC GACCCCTGGC TGGAGCAGCG CTATTCGGGG
GACTGA
 
Protein sequence
MTDETAPSSE SKLTQSKQRW AREGKFLTGR TARPAEQRLP PGQHLTRDWP VLDLGVVPQI 
GRERWRLDVH GAVAAPQFWD FSQFMAQPQA QFVSDIHCVT TWSRYDNQWQ GLPTRELLAA
CRPHAEARHV LLHSYDGYTT NLALEDFAAE DALLAQAWSG APLTQEHGGP VRLVVPQLYF
WKSAKWIQSI EFVAADAPGY WEVRGYHNRG DPWLEQRYSG D